二硫中毒相关基因标记预测非小细胞肺癌的预后和放射耐药

IF 5 2区 医学 Q2 Medicine
Jianmin Liu , Juan Wang , Jia Wang , Meng Wu , Jinming Yu , Dawei Chen
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引用次数: 0

摘要

背景:非小细胞肺癌具有极高的死亡率,目前的治疗方式和治疗策略的选择存在局限性。细胞过度表达胱氨酸/谷氨酸转运蛋白并经历葡萄糖短缺可导致NADPH缺乏和过量的二硫积累,引起应激反应和细胞死亡,影响患者预后。方法和材料基于TCGA和GEO数据集,对NSCLC患者进行共识聚类,以确定二硫嘧啶相关基因并构建预后模型。在多个数据集上验证了该模型的预测能力。生存分析、基因组突变和免疫浸润被用来描述不同风险群体的表观遗传改变。采用多种放疗相关的NSCLC数据集和放射耐药细胞系来探索二硫中毒相关基因与放疗的关系。结果我们确定了9个与二硫中毒相关的预后基因(DAPGs),并计算了二硫中毒相关的风险评分(DRRS)。风险组在预后、基因组突变和免疫浸润方面存在差异。高DRRS组caf和上皮间质转化显著富集。该预后模型还能有效预测放疗患者的预后,DAPGs的表达,尤其是KIF14的表达与DNA损伤和修复密切相关,并且在放射耐药细胞中观察到KIF14的高表达。结论研究结果表明,与双翘症相关的预后模型可以区分患者之间的预后差异,从而允许更个性化的治疗策略。KIF14的机制可能为对抗放射耐药和更好地理解双曲下垂与放疗之间的相互作用提供基础。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Disulfidptosis-associated gene signature predicts prognosis and radioresistance in NSCLC

Background

NSCLC has an extremely high mortality rate, and limitations exist in the efficacy of current therapeutic modalities and the choice of treatment strategies. Cells overexpressing cystine/glutamate transporter proteins and experiencing a glucose shortage could lead to NADPH deficiency and excessive disulfide buildup, causing stress responses and cell death, which affects patient’s prognosis.

Methods and materials

Based on TCGA and GEO datasets, consensus clustering of NSCLC patients was performed to identify disulfidptosis-related genes and construct a prognostic model. The predictive ability of the model was validated in multiple datasets. Survival analysis, genomic mutations, and immune infiltration were used to characterize epigenetic alterations in different risk groups. Multiple radiotherapy-associated NSCLC datasets and radioresistant cell lines were employed to explore the relationship between disulfidptosis-related genes and radiotherapy.

Results

We identified nine disulfidptosis-associated prognostic genes (DAPGs) and calculated the disulfidptosis-relevant risk score (DRRS). The risk groups showed a difference in prognosis, genomic mutations, and immune infiltration. CAFs and epithelial-mesenchymal transition significantly enriched in the high DRRS group. The prognostic model also effectively predicted the prognosis of patients receiving radiotherapy, and expression of DAPGs, especially KIF14, is strongly associated with DNA damage and repair, and high expression of KIF14 was observed in radioresistant cells.

Conclusions

Our findings imply that a prognostic model related to disulfidptosis could distinguish the prognostic differences among patients, allowing for more personalized treatment strategies. The mechanisms of KIF14 may provide a basis for combating radioresistance and a better understanding of the interaction between disulfidptosis and radiotherapy.
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来源期刊
CiteScore
8.40
自引率
2.00%
发文量
314
审稿时长
54 days
期刊介绍: Translational Oncology publishes the results of novel research investigations which bridge the laboratory and clinical settings including risk assessment, cellular and molecular characterization, prevention, detection, diagnosis and treatment of human cancers with the overall goal of improving the clinical care of oncology patients. Translational Oncology will publish laboratory studies of novel therapeutic interventions as well as clinical trials which evaluate new treatment paradigms for cancer. Peer reviewed manuscript types include Original Reports, Reviews and Editorials.
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