{"title":"阿尔茨海默病和2型糖尿病的常见mirna、基因和调控途径:系统综述、生物信息学和数据挖掘的综合分析","authors":"Lívia Cristina Ribeiro Teixeira, Jessica Diniz Pereira, Izabela Mamede, Paulo Caramelli, Vítor Corrêa Silva, Adriano Alonso Veloso, Marcelo Rizzatti Luizon, Karina Braga Gomes","doi":"10.1111/jnc.70196","DOIUrl":null,"url":null,"abstract":"<p>Alzheimer's disease (AD) and type 2 diabetes mellitus (T2DM) are frequent conditions affecting older adults, with evidence suggesting a higher predisposition for AD in diabetic patients. MicroRNAs (miRNAs) are proposed as regulators of gene expression in the mutual pathways among these diseases. This study aimed to investigate circulating miRNAs found to be expressed both in AD and T2DM, as well as their target genes and associated molecular pathways, using systematic reviews (SRs), bioinformatics analyses, and data mining. Two independent SRs were conducted to identify differentially expressed miRNAs in AD and T2DM compared to their respective controls. Searches covered major databases (EMBASE, PubMed, Cochrane, Scopus, Cinahl, Web of Science), gray literature, and reference lists, following the Joanna Briggs Institute (JBI) and PRISMA guidelines. Results were combined to identify miRNAs shared by both AD and T2DM, with target genes extracted from miRTarBase. Pathway enrichment analysis was performed using EnrichR, and relevant pathways were ranked based on gene involvement frequency with artificial intelligence tools. From the SRs (AD: 49 studies; T2DM: 104 studies), 21 miRNAs were identified as commonly expressed (10 upregulated, and 11 downregulated). 337 and 233 genes are potential targets for these down- and upregulated miRNAs, respectively. The key pathways identified from those genes were the TCR-RAS signaling cascade for downregulated miRNAs and the extracellular matrix pathway for upregulated miRNAs. Our findings highlight shared biological pathways between AD and T2DM and provide insights into their shared pathophysiology and potential therapeutic targets.</p><p>\n \n <figure>\n <div><picture>\n <source></source></picture><p></p>\n </div>\n </figure>\n </p>","PeriodicalId":16527,"journal":{"name":"Journal of Neurochemistry","volume":"169 8","pages":""},"PeriodicalIF":4.0000,"publicationDate":"2025-08-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/jnc.70196","citationCount":"0","resultStr":"{\"title\":\"Common miRNAs, Genes, and Regulatory Pathways in Alzheimer's Disease and Type 2 Diabetes Mellitus: An Integrative Analysis of Systematic Reviews, Bioinformatics and Data Mining\",\"authors\":\"Lívia Cristina Ribeiro Teixeira, Jessica Diniz Pereira, Izabela Mamede, Paulo Caramelli, Vítor Corrêa Silva, Adriano Alonso Veloso, Marcelo Rizzatti Luizon, Karina Braga Gomes\",\"doi\":\"10.1111/jnc.70196\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>Alzheimer's disease (AD) and type 2 diabetes mellitus (T2DM) are frequent conditions affecting older adults, with evidence suggesting a higher predisposition for AD in diabetic patients. MicroRNAs (miRNAs) are proposed as regulators of gene expression in the mutual pathways among these diseases. This study aimed to investigate circulating miRNAs found to be expressed both in AD and T2DM, as well as their target genes and associated molecular pathways, using systematic reviews (SRs), bioinformatics analyses, and data mining. Two independent SRs were conducted to identify differentially expressed miRNAs in AD and T2DM compared to their respective controls. Searches covered major databases (EMBASE, PubMed, Cochrane, Scopus, Cinahl, Web of Science), gray literature, and reference lists, following the Joanna Briggs Institute (JBI) and PRISMA guidelines. Results were combined to identify miRNAs shared by both AD and T2DM, with target genes extracted from miRTarBase. Pathway enrichment analysis was performed using EnrichR, and relevant pathways were ranked based on gene involvement frequency with artificial intelligence tools. From the SRs (AD: 49 studies; T2DM: 104 studies), 21 miRNAs were identified as commonly expressed (10 upregulated, and 11 downregulated). 337 and 233 genes are potential targets for these down- and upregulated miRNAs, respectively. The key pathways identified from those genes were the TCR-RAS signaling cascade for downregulated miRNAs and the extracellular matrix pathway for upregulated miRNAs. Our findings highlight shared biological pathways between AD and T2DM and provide insights into their shared pathophysiology and potential therapeutic targets.</p><p>\\n \\n <figure>\\n <div><picture>\\n <source></source></picture><p></p>\\n </div>\\n </figure>\\n </p>\",\"PeriodicalId\":16527,\"journal\":{\"name\":\"Journal of Neurochemistry\",\"volume\":\"169 8\",\"pages\":\"\"},\"PeriodicalIF\":4.0000,\"publicationDate\":\"2025-08-18\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://onlinelibrary.wiley.com/doi/epdf/10.1111/jnc.70196\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Neurochemistry\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://onlinelibrary.wiley.com/doi/10.1111/jnc.70196\",\"RegionNum\":3,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"BIOCHEMISTRY & MOLECULAR BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Neurochemistry","FirstCategoryId":"3","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1111/jnc.70196","RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
引用次数: 0
摘要
阿尔茨海默病(AD)和2型糖尿病(T2DM)是影响老年人的常见疾病,有证据表明糖尿病患者患AD的易感性更高。MicroRNAs (miRNAs)被认为是这些疾病相互通路中基因表达的调节因子。本研究旨在通过系统综述(SRs)、生物信息学分析和数据挖掘,研究AD和T2DM中表达的循环mirna,以及它们的靶基因和相关分子途径。进行了两个独立的SRs来鉴定AD和T2DM中与各自对照组相比差异表达的mirna。搜索涵盖了主要数据库(EMBASE, PubMed, Cochrane, Scopus, Cinahl, Web of Science),灰色文献和参考文献列表,遵循乔安娜布里格斯研究所(JBI)和PRISMA指南。结合结果鉴定AD和T2DM共有的mirna,并从miRTarBase中提取靶基因。利用enrichment进行途径富集分析,并利用人工智能工具根据基因参与频率对相关途径进行排序。从SRs (AD: 49项研究;T2DM: 104项研究),21个mirna被确定为常见表达(10个上调,11个下调)。337和233基因分别是这些下调和上调的mirna的潜在靶标。从这些基因中鉴定出的关键通路是表达下调miRNAs的TCR-RAS信号级联通路和表达上调miRNAs的细胞外基质通路。我们的研究结果强调了AD和T2DM之间共同的生物学途径,并为它们共同的病理生理和潜在的治疗靶点提供了见解。
Common miRNAs, Genes, and Regulatory Pathways in Alzheimer's Disease and Type 2 Diabetes Mellitus: An Integrative Analysis of Systematic Reviews, Bioinformatics and Data Mining
Alzheimer's disease (AD) and type 2 diabetes mellitus (T2DM) are frequent conditions affecting older adults, with evidence suggesting a higher predisposition for AD in diabetic patients. MicroRNAs (miRNAs) are proposed as regulators of gene expression in the mutual pathways among these diseases. This study aimed to investigate circulating miRNAs found to be expressed both in AD and T2DM, as well as their target genes and associated molecular pathways, using systematic reviews (SRs), bioinformatics analyses, and data mining. Two independent SRs were conducted to identify differentially expressed miRNAs in AD and T2DM compared to their respective controls. Searches covered major databases (EMBASE, PubMed, Cochrane, Scopus, Cinahl, Web of Science), gray literature, and reference lists, following the Joanna Briggs Institute (JBI) and PRISMA guidelines. Results were combined to identify miRNAs shared by both AD and T2DM, with target genes extracted from miRTarBase. Pathway enrichment analysis was performed using EnrichR, and relevant pathways were ranked based on gene involvement frequency with artificial intelligence tools. From the SRs (AD: 49 studies; T2DM: 104 studies), 21 miRNAs were identified as commonly expressed (10 upregulated, and 11 downregulated). 337 and 233 genes are potential targets for these down- and upregulated miRNAs, respectively. The key pathways identified from those genes were the TCR-RAS signaling cascade for downregulated miRNAs and the extracellular matrix pathway for upregulated miRNAs. Our findings highlight shared biological pathways between AD and T2DM and provide insights into their shared pathophysiology and potential therapeutic targets.
期刊介绍:
Journal of Neurochemistry focuses on molecular, cellular and biochemical aspects of the nervous system, the pathogenesis of neurological disorders and the development of disease specific biomarkers. It is devoted to the prompt publication of original findings of the highest scientific priority and value that provide novel mechanistic insights, represent a clear advance over previous studies and have the potential to generate exciting future research.