盐胁迫下锥体小柱头thaumatin样蛋白的结构和转录特性

IF 1.3 4区 生物学 Q4 GENETICS & HEREDITY
Maria Cidinaria Silva Alves, Carlos André Dos Santos-Silva, Carolline de Jesús-Pires, Flávia Czekalski de Araújo, José Ribamar Costa Ferreira-Neto, Gabriella Frosi, Marx Oliveira-Lima, Fernanda Alves de Andrade, Ana Maria Benko-Iseppon, Valesca Pandolfi
{"title":"盐胁迫下锥体小柱头thaumatin样蛋白的结构和转录特性","authors":"Maria Cidinaria Silva Alves, Carlos André Dos Santos-Silva, Carolline de Jesús-Pires, Flávia Czekalski de Araújo, José Ribamar Costa Ferreira-Neto, Gabriella Frosi, Marx Oliveira-Lima, Fernanda Alves de Andrade, Ana Maria Benko-Iseppon, Valesca Pandolfi","doi":"10.1007/s10709-025-00242-7","DOIUrl":null,"url":null,"abstract":"<p><p>Thaumatin-Like Proteins (TLPs) play a crucial role against biotic and abiotic stresses, acting as signaling molecules in transduction pathways and exhibiting antimicrobial activity. The present study aimed to characterize TLPs of Cenostigma pyramidale (Fabaceae) and analyze their expression (RNA-Seq) in root tissues under salt stress. A total of 36 CpTLPs were identified, which showed the characteristic TLP domain and a signal peptide in the N-terminal region. Multiple sequence alignment revealed the conservation of 16 cysteine residues, a signature motif, and a \"REDDD\" motif, all characteristic of TLPs. Three typical TLPs domains were identified in the three-dimensional modeling of the six analyzed sequences. The molecular dynamics simulation revealed stability along most of these sequences. RNA-seq under salt stress showed that six C. pyramidale TLPs (CpTLP2, CpTLP3, CpTLP5, CpTLP17, CpTLP20, and CpTLP31) were differentially expressed. The RT-qPCR expression validation was performed in leaf and root tissues (30 min, 2 h, and 11 days after salt stress). In leaf tissue, most CpTLPs were induced in at least one time point analyzed. In root tissue, we observed validation of the RNA-Seq expression data of CpTLP3, CpTLP5, CpTLP20, and CpTLP31, as well as distinct expression patterns between leaf and root tissues. Our results showed significant variations in the transcriptional response of the TLP family across different plant tissues and associated specific genes of this family with salt tolerance in C. pyramidale. These findings enhance the understanding of the role of TLPs in salt stress and may be useful in genetic improvement strategies to increase salt tolerance.</p>","PeriodicalId":55121,"journal":{"name":"Genetica","volume":"153 1","pages":"26"},"PeriodicalIF":1.3000,"publicationDate":"2025-08-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Structural and transcriptional characterization of Thaumatin-Like Proteins in Cenostigma pyramidale under salt stress.\",\"authors\":\"Maria Cidinaria Silva Alves, Carlos André Dos Santos-Silva, Carolline de Jesús-Pires, Flávia Czekalski de Araújo, José Ribamar Costa Ferreira-Neto, Gabriella Frosi, Marx Oliveira-Lima, Fernanda Alves de Andrade, Ana Maria Benko-Iseppon, Valesca Pandolfi\",\"doi\":\"10.1007/s10709-025-00242-7\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Thaumatin-Like Proteins (TLPs) play a crucial role against biotic and abiotic stresses, acting as signaling molecules in transduction pathways and exhibiting antimicrobial activity. The present study aimed to characterize TLPs of Cenostigma pyramidale (Fabaceae) and analyze their expression (RNA-Seq) in root tissues under salt stress. A total of 36 CpTLPs were identified, which showed the characteristic TLP domain and a signal peptide in the N-terminal region. Multiple sequence alignment revealed the conservation of 16 cysteine residues, a signature motif, and a \\\"REDDD\\\" motif, all characteristic of TLPs. Three typical TLPs domains were identified in the three-dimensional modeling of the six analyzed sequences. The molecular dynamics simulation revealed stability along most of these sequences. RNA-seq under salt stress showed that six C. pyramidale TLPs (CpTLP2, CpTLP3, CpTLP5, CpTLP17, CpTLP20, and CpTLP31) were differentially expressed. The RT-qPCR expression validation was performed in leaf and root tissues (30 min, 2 h, and 11 days after salt stress). In leaf tissue, most CpTLPs were induced in at least one time point analyzed. In root tissue, we observed validation of the RNA-Seq expression data of CpTLP3, CpTLP5, CpTLP20, and CpTLP31, as well as distinct expression patterns between leaf and root tissues. Our results showed significant variations in the transcriptional response of the TLP family across different plant tissues and associated specific genes of this family with salt tolerance in C. pyramidale. These findings enhance the understanding of the role of TLPs in salt stress and may be useful in genetic improvement strategies to increase salt tolerance.</p>\",\"PeriodicalId\":55121,\"journal\":{\"name\":\"Genetica\",\"volume\":\"153 1\",\"pages\":\"26\"},\"PeriodicalIF\":1.3000,\"publicationDate\":\"2025-08-14\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Genetica\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1007/s10709-025-00242-7\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"GENETICS & HEREDITY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Genetica","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1007/s10709-025-00242-7","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
引用次数: 0

摘要

TLPs在生物和非生物胁迫中起着至关重要的作用,在转导途径中作为信号分子并表现出抗菌活性。本研究旨在分析盐胁迫下玉米荚科(Cenostigma pyramidale) TLPs的特征,并分析其在根组织中的表达(RNA-Seq)。共鉴定出36个CpTLPs,它们具有TLP结构域特征和n端信号肽。多重序列比对发现,16个半胱氨酸残基、一个特征基序和一个“REDDD”基序都是TLPs的特征。通过对6个分析序列的三维建模,确定了3个典型的TLPs结构域。分子动力学模拟显示,这些序列大部分都是稳定的。盐胁迫下的RNA-seq结果显示,6个C. pyramidale TLPs (CpTLP2、CpTLP3、CpTLP5、CpTLP17、CpTLP20和CpTLP31)均有差异表达。在盐胁迫后30 min、2 h和11 d的叶片和根组织中进行RT-qPCR表达验证。在叶片组织中,大多数CpTLPs至少在一个时间点被诱导。在根组织中,我们观察到了CpTLP3、CpTLP5、CpTLP20和CpTLP31的RNA-Seq表达数据的验证,以及叶片和根组织之间不同的表达模式。我们的研究结果显示,TLP家族在不同植物组织中的转录反应存在显著差异,并且该家族的特定基因与玉米耐盐性相关。这些发现增强了对TLPs在盐胁迫中的作用的理解,并可能有助于提高盐耐受性的遗传改良策略。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Structural and transcriptional characterization of Thaumatin-Like Proteins in Cenostigma pyramidale under salt stress.

Thaumatin-Like Proteins (TLPs) play a crucial role against biotic and abiotic stresses, acting as signaling molecules in transduction pathways and exhibiting antimicrobial activity. The present study aimed to characterize TLPs of Cenostigma pyramidale (Fabaceae) and analyze their expression (RNA-Seq) in root tissues under salt stress. A total of 36 CpTLPs were identified, which showed the characteristic TLP domain and a signal peptide in the N-terminal region. Multiple sequence alignment revealed the conservation of 16 cysteine residues, a signature motif, and a "REDDD" motif, all characteristic of TLPs. Three typical TLPs domains were identified in the three-dimensional modeling of the six analyzed sequences. The molecular dynamics simulation revealed stability along most of these sequences. RNA-seq under salt stress showed that six C. pyramidale TLPs (CpTLP2, CpTLP3, CpTLP5, CpTLP17, CpTLP20, and CpTLP31) were differentially expressed. The RT-qPCR expression validation was performed in leaf and root tissues (30 min, 2 h, and 11 days after salt stress). In leaf tissue, most CpTLPs were induced in at least one time point analyzed. In root tissue, we observed validation of the RNA-Seq expression data of CpTLP3, CpTLP5, CpTLP20, and CpTLP31, as well as distinct expression patterns between leaf and root tissues. Our results showed significant variations in the transcriptional response of the TLP family across different plant tissues and associated specific genes of this family with salt tolerance in C. pyramidale. These findings enhance the understanding of the role of TLPs in salt stress and may be useful in genetic improvement strategies to increase salt tolerance.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Genetica
Genetica 生物-遗传学
CiteScore
2.70
自引率
0.00%
发文量
32
审稿时长
>12 weeks
期刊介绍: Genetica publishes papers dealing with genetics, genomics, and evolution. Our journal covers novel advances in the fields of genomics, conservation genetics, genotype-phenotype interactions, evo-devo, population and quantitative genetics, and biodiversity. Genetica publishes original research articles addressing novel conceptual, experimental, and theoretical issues in these areas, whatever the taxon considered. Biomedical papers and papers on breeding animal and plant genetics are not within the scope of Genetica, unless framed in an evolutionary context. Recent advances in genetics, genomics and evolution are also published in thematic issues and synthesis papers published by experts in the field.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信