优化MALDI-TOF质谱数据库,用于检测不同环境下的嗜干真菌。

UCL open environment Pub Date : 2025-07-29 eCollection Date: 2025-01-01 DOI:10.14324/111.444/ucloe.3244
Christopher Campion, Victor Carp Kofoed, Jeppe Lund Nielsen, Anne Mette Madsen
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引用次数: 0

摘要

嗜干真菌可以在干燥条件下繁殖,在文化遗产和图书馆中也发现了这种真菌。为了保护工作人员免受真菌的侵害,确保文物收藏的保存,必须集中研究改进嗜干真菌的检测方案。基质辅助激光解吸/电离飞行时间质谱法为真菌鉴定提供了强有力的方法;但是,这取决于参考数据库。本研究的目的是研究是否有可能建立一个补充的基质辅助激光解吸/电离飞行时间质谱数据库,用于研究嗜干/耐干曲霉物种。该数据库旨在补充当前的Bruker库;这19种曲霉生长在4种不同的肉汤培养基中。该数据库是对来自家庭、博物馆和仓库的样本进行评估的。这就有可能建立一个包含19个物种质谱的数据库。对于某些菌种,可以从四种培养基中产生质谱,而其他菌种需要特定的培养基和延长的培养时间。通过Bruker真菌文库鉴定的环境样品中的分离株没有被补充数据库错误鉴定,而一些先前未鉴定的分离株(曲霉、家曲霉、光曲霉和伪细曲霉)可以被鉴定出来。使用低水活度琼脂培养基对这些嗜干/耐干曲霉的检测有深远的影响。这项工作表明,有可能开发一个补充的基质辅助激光解吸/电离飞行时间质谱数据库,用于鉴定嗜干/耐干曲霉物种,并且推荐低水活性的肉汤介质用于构建数据库和以下应用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Optimising a MALDI-TOF MS database for the detection of xerophilic fungi across environments.

Xerophilic fungi can proliferate in dry conditions and have been detected in cultural heritage sites and libraries. To protect the staff from fungal exposure and ensure the preservation of heritage collections, research must be focused on improving detection protocols for xerophilic fungi. Matrix-assisted laser desorption/ionisation time-of-flight mass spectrometry provides a strong method for the identification of fungi; however, this is dependent on the reference database. The aim of this study was to investigate whether it is possible to develop a supplementary matrix-assisted laser desorption/ionisation time-of-flight mass spectrometry database of xerophilic/xerotolerant Aspergillus species. The database is intended to complement the current Bruker library; for this 19 Aspergillus species grown in four different broth media were included. The database was evaluated on samples from domestic homes, a museum and a warehouse. It was possible to create a database with mass spectra from the 19 species. For some species, it was possible to generate mass spectra from the four tested broth media, while other species required specific media and extended incubation time. Isolates from environmental samples identified by the Bruker fungi library were not misidentified by the supplementary database while some previously unidentified isolates (Aspergillus conicus, Aspergillus domesticus, Aspergillus glabribes and Aspergillus pseudogracilis) could be identified. Using low water-activity agar media had a profound effect on detection of these xerophilic/xerotolerant Aspergillus species. This work shows that it is possible to develop a supplementary matrix-assisted laser desorption/ionisation time-of-flight mass spectrometry database for the identification of xerophilic/xerotolerant Aspergillus species, and that low-water activity broth media are recommended for the construction of a database and the following application.

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