关于Wnt通路的结构性质、稳态和非结合交换代数的一些结果。

IF 1.5
Quentin Vanhaelen
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引用次数: 0

摘要

我们考虑一个具有质量作用动力学的Wnt通路反应网络。利用化学反应网络理论中鲁棒性和稳定性理论的概念以及反应网络分解的进展,我们对该途径的结构、结构动力学和动力学性质进行了系统的分析。我们证明了网络可以被系统地分解成一组子网络,并利用元素矩阵理论研究了它们的稳定性。考虑到正的化学计量类,我们得到了正稳态的解析表达式,并在通路的破坏复合物的核心内确定了三个具有绝对浓度鲁棒性的物质。我们确定了承认边界稳态的非负化学计量类。我们构造了与该系统相关的非结合交换代数,并结合代数和算法方法来表征其结构性质,构造其子代数,并展示了它们与允许边界稳态解的边界初始条件的存在性的关系。我们还证明了一类子代数的存在性,这些子代数对大多数非负初始条件产生无界解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Some results about the structural properties of the Wnt pathway, its steady states and its non-associative commutative algebra.

We consider a reaction network of the Wnt pathway endowed with mass-action kinetics. Using concepts in the theory of robustness and stability within Chemical Reaction Network Theory and advances in decomposing reaction networks, we perform a systematic analysis of the structural, structo-kinetic and kinetic properties of this pathway. We show that the network can be systematically decomposed into a set of subnetworks and we use elements matrix theory to study their stability properties. Considering the positive stoichiometric classes, we obtain the analytical expressions of the positive steady states and we identify three species with absolute concentration robustness within the core of the destruction complex of the pathway. We identify nonnegative stoichiometric classes which admit boundary steady states. We construct the non-associative commutative algebra associated with the system and combine algebraic and algorithmic approaches to characterize its structural properties, construct its subalgebras, and show how they relate to the existence of boundary initial conditions which admit boundary steady state solutions. We also show the existence of a category of subalgebras which generate unbounded solutions for most of the nonnegative initial conditions.

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