优化的斑马鱼致肥试验方案及基于人工智能的致肥物与抗致肥物筛选分析软件

IF 1.3 Q3 BIOCHEMICAL RESEARCH METHODS
Biology Methods and Protocols Pub Date : 2025-07-01 eCollection Date: 2025-01-01 DOI:10.1093/biomethods/bpaf052
Sara Al Kassir, Théo Mercé, Sandra Pedemay, Laure M Bourcier, Magalie Soares, Hélène Le Mentec, Normand Podechard, Anja Knoll-Gellida, Patrick J Babin
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引用次数: 0

摘要

肥胖被定义为一种身体脂肪异常过度积累对健康造成不利影响的疾病。肥胖增加的一个因素是暴露于内分泌干扰物中,这些干扰物起到了致肥的作用。半透明斑马鱼幼体,具有发育良好的白色脂肪组织(WAT),为研究有毒化学物质和药物对脊椎动物模型中脂肪细胞动力学和整体脂肪的影响提供了独特的机会。本文介绍了一种详细优化的斑马鱼致肥试验(ZOT)方案。该方法可以评估饮食成分、药物和环境污染物(单独或联合作为致肥剂或抗致肥剂)对斑马鱼幼虫WAT水平的影响。提供了动物技术参数指南,包括幼虫饲养条件,喂养和选择要登记的幼虫。提供了一种优化的方法,用于在暴露于化合物之前和之后用尼罗红对脂肪细胞脂滴进行体内染色,以提高再现性。利用合适的皮下WAT位置,合理定义宽视场荧光显微镜信号采集指南。ZOT分析软件的开发是为了通过使用定制训练的监督深度学习模型来实现自动化和高效的图像数据处理。目前的ZOT方案将测试方法的内在可变性与测量的生物效应区分开来。它是一种特异性、敏感性和强大的体内定量分析的基础,用于高通量筛选影响脂肪细胞过度/减少的化合物和食物含量。因此,它为环境和人类风险和利益评估提供了相关信息。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
An optimized zebrafish obesogenic test protocol with an artificial intelligence-based analysis software for screening obesogens and anti-obesogens.

Obesity is defined as a disease in which abnormal excessive body fat accumulation causes adverse effects on health. One proposed contributing factor to the rise in obesity is the exposure to endocrine disruptors acting as obesogens. Semitransparent zebrafish larvae, with their well-developed white adipose tissue (WAT), offer a unique opportunity for studying the effects of toxicant chemicals and pharmaceuticals on adipocyte dynamics and whole-organism adiposity in a vertebrate model. The work presented here is a detailed optimized zebrafish obesogenic test (ZOT) protocol. The method allows to assess the effects of diet composition, drugs and environmental contaminants, acting as obesogens or anti-obesogens, alone or in combination, on WAT levels in zebrafish larvae. Zootechnical parameter guidelines, including larvae rearing conditions, feeding, and selection of larvae to be enrolled are provided. An optimized procedure for in vivo staining of adipocyte lipid droplets with Nile Red before and after exposure to compounds is provided to enhance reproducibility. Using suitable subcutaneous WAT locations, a rationally defined guide for wide-field fluorescence microscopy signal acquisition is proposed. The ZOT analysis software was developed to enable automated and efficient image data processing by using custom-trained supervised deep-learning models. The present ZOT protocol distinguishes intrinsic variability of the test method from the biological effect measured. It is the basis of a specific, sensitive, and robust quantitative in vivo assay for high-throughput screening of compounds and food content that influence adipocyte hyper/hypotrophy. As such, it provides relevant information for environmental as well as human risk and benefit assessments.

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来源期刊
Biology Methods and Protocols
Biology Methods and Protocols Agricultural and Biological Sciences-Agricultural and Biological Sciences (all)
CiteScore
3.80
自引率
2.80%
发文量
28
审稿时长
19 weeks
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