Zahrasadat Momenzadeh Abardeh, Alireza Salimi and Artem R. Oganov
{"title":"晶体结构预测中的合成模块化:设计多晶和共晶†","authors":"Zahrasadat Momenzadeh Abardeh, Alireza Salimi and Artem R. Oganov","doi":"10.1039/D5CE00079C","DOIUrl":null,"url":null,"abstract":"<p >Synthon modularity is valuable for crystal structure prediction (<strong>CSP</strong>), allowing for the rationalization of polymorphs and co-crystals. This work used <strong>CSP</strong> to investigate the crystal structures of the pharmaceutical compound pomalidomide and its co-crystals with urea, gallic acid, and 3,4-dihydroxybenzoic acid (<strong>DHBA</strong>). By integrating crystal engineering (CE) principles and leveraging the concept of synthon modularity, we identified and characterized two polymorphs of pomalidomide (forms A and B) and proposed its co-crystal structures. Comparative analysis with analogous compounds like thalidomide and lenalidomide revealed shared synthon interactions, supporting the predictive reliability of the approach. These findings highlight the potential of synthon-guided <strong>CSP</strong> in advancing pharmaceutical crystallography and fostering the development of novel materials.</p>","PeriodicalId":70,"journal":{"name":"CrystEngComm","volume":" 32","pages":" 5514-5526"},"PeriodicalIF":2.6000,"publicationDate":"2025-07-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Synthon modularity in crystal structure prediction: designing pomalidomide polymorphs and co-crystals†\",\"authors\":\"Zahrasadat Momenzadeh Abardeh, Alireza Salimi and Artem R. Oganov\",\"doi\":\"10.1039/D5CE00079C\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p >Synthon modularity is valuable for crystal structure prediction (<strong>CSP</strong>), allowing for the rationalization of polymorphs and co-crystals. This work used <strong>CSP</strong> to investigate the crystal structures of the pharmaceutical compound pomalidomide and its co-crystals with urea, gallic acid, and 3,4-dihydroxybenzoic acid (<strong>DHBA</strong>). By integrating crystal engineering (CE) principles and leveraging the concept of synthon modularity, we identified and characterized two polymorphs of pomalidomide (forms A and B) and proposed its co-crystal structures. Comparative analysis with analogous compounds like thalidomide and lenalidomide revealed shared synthon interactions, supporting the predictive reliability of the approach. These findings highlight the potential of synthon-guided <strong>CSP</strong> in advancing pharmaceutical crystallography and fostering the development of novel materials.</p>\",\"PeriodicalId\":70,\"journal\":{\"name\":\"CrystEngComm\",\"volume\":\" 32\",\"pages\":\" 5514-5526\"},\"PeriodicalIF\":2.6000,\"publicationDate\":\"2025-07-11\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"CrystEngComm\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://pubs.rsc.org/en/content/articlelanding/2025/ce/d5ce00079c\",\"RegionNum\":3,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"CHEMISTRY, MULTIDISCIPLINARY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"CrystEngComm","FirstCategoryId":"92","ListUrlMain":"https://pubs.rsc.org/en/content/articlelanding/2025/ce/d5ce00079c","RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
Synthon modularity in crystal structure prediction: designing pomalidomide polymorphs and co-crystals†
Synthon modularity is valuable for crystal structure prediction (CSP), allowing for the rationalization of polymorphs and co-crystals. This work used CSP to investigate the crystal structures of the pharmaceutical compound pomalidomide and its co-crystals with urea, gallic acid, and 3,4-dihydroxybenzoic acid (DHBA). By integrating crystal engineering (CE) principles and leveraging the concept of synthon modularity, we identified and characterized two polymorphs of pomalidomide (forms A and B) and proposed its co-crystal structures. Comparative analysis with analogous compounds like thalidomide and lenalidomide revealed shared synthon interactions, supporting the predictive reliability of the approach. These findings highlight the potential of synthon-guided CSP in advancing pharmaceutical crystallography and fostering the development of novel materials.