单细胞测序揭示小鼠背根神经节细胞异质性。

IF 4 3区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY
Yiting Chen, Yuying Wang, Yucong Zhu, Xinyu Zheng, Jing Wang, Xiuyu Nong, Xi Chen, Lingzhi Wang, Ailin Tao, Xueting Liu
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引用次数: 0

摘要

背根神经节在感觉传导和调节中起着至关重要的作用。然而,背根神经节内不同类型细胞的具体生理功能仍然知之甚少。本研究从NCBI数据库中获得了3个生理小鼠背根神经节数据(GSE155622),共获得了14 902个细胞的数据。基于基因图谱,我们鉴定了神经元、免疫细胞、成纤维细胞、卫星神经胶质细胞、雪旺细胞、血管内皮细胞和血管平滑肌细胞。我们的研究结果利用QuSAGE、GO和KEGG富集方法发现了每个细胞亚型的功能富集,通过伪时间分析确定了细胞亚型的进化轨迹,并构建了一个全面的细胞通信网络。通过RNAscope原位杂交和ISH-IHC双染色验证未处理C57BL/6小鼠DRG组织中标记基因和瘙痒相关基因的表达。总之,我们的研究结果揭示了小鼠背根神经节的细胞异质性,为小鼠生理学提供了新的见解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Single Cell Sequencing Reveals Cellular Heterogeneity in Mouse Dorsal Root Ganglion.

The dorsal root ganglion plays a crucial role in sensory transduction and modulation. Nevertheless, the specific physiological functions of the diverse cell types within the dorsal root ganglion remain poorly understood. Here, three physiologic mouse dorsal root ganglion data (GSE155622) were obtained from the NCBI database, yielding data on a total of 14 902 cells. Based on the genetic profiles, we identified neurons, immune cells, fibroblasts, satellite glial cells, Schwann cells, vascular endothelial cells, and vascular smooth muscle cells. Our results found functional enrichment of each cell subtype utilizing QuSAGE, GO, and KEGG enrichment methodologies, determined the evolutionary trajectories of cell subtypes through pseudo-temporal analysis, and constructed a comprehensive cellular communication network. Furthermore, RNAscope in situ hybridization and ISH-IHC double staining were performed to verify the expression of marker genes and itch-related genes in DRG tissues of C57BL/6 mice with no treatment. In summary, our findings reveal cellular heterogeneity in mouse dorsal root ganglion, which offers novel insights into the physiology of mice.

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来源期刊
Journal of Neurochemistry
Journal of Neurochemistry 医学-神经科学
CiteScore
9.30
自引率
2.10%
发文量
181
审稿时长
2.2 months
期刊介绍: Journal of Neurochemistry focuses on molecular, cellular and biochemical aspects of the nervous system, the pathogenesis of neurological disorders and the development of disease specific biomarkers. It is devoted to the prompt publication of original findings of the highest scientific priority and value that provide novel mechanistic insights, represent a clear advance over previous studies and have the potential to generate exciting future research.
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