Yiting Chen, Yuying Wang, Yucong Zhu, Xinyu Zheng, Jing Wang, Xiuyu Nong, Xi Chen, Lingzhi Wang, Ailin Tao, Xueting Liu
{"title":"单细胞测序揭示小鼠背根神经节细胞异质性。","authors":"Yiting Chen, Yuying Wang, Yucong Zhu, Xinyu Zheng, Jing Wang, Xiuyu Nong, Xi Chen, Lingzhi Wang, Ailin Tao, Xueting Liu","doi":"10.1111/jnc.70180","DOIUrl":null,"url":null,"abstract":"<p><p>The dorsal root ganglion plays a crucial role in sensory transduction and modulation. Nevertheless, the specific physiological functions of the diverse cell types within the dorsal root ganglion remain poorly understood. Here, three physiologic mouse dorsal root ganglion data (GSE155622) were obtained from the NCBI database, yielding data on a total of 14 902 cells. Based on the genetic profiles, we identified neurons, immune cells, fibroblasts, satellite glial cells, Schwann cells, vascular endothelial cells, and vascular smooth muscle cells. Our results found functional enrichment of each cell subtype utilizing QuSAGE, GO, and KEGG enrichment methodologies, determined the evolutionary trajectories of cell subtypes through pseudo-temporal analysis, and constructed a comprehensive cellular communication network. Furthermore, RNAscope in situ hybridization and ISH-IHC double staining were performed to verify the expression of marker genes and itch-related genes in DRG tissues of C57BL/6 mice with no treatment. In summary, our findings reveal cellular heterogeneity in mouse dorsal root ganglion, which offers novel insights into the physiology of mice.</p>","PeriodicalId":16527,"journal":{"name":"Journal of Neurochemistry","volume":"169 8","pages":"e70180"},"PeriodicalIF":4.0000,"publicationDate":"2025-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Single Cell Sequencing Reveals Cellular Heterogeneity in Mouse Dorsal Root Ganglion.\",\"authors\":\"Yiting Chen, Yuying Wang, Yucong Zhu, Xinyu Zheng, Jing Wang, Xiuyu Nong, Xi Chen, Lingzhi Wang, Ailin Tao, Xueting Liu\",\"doi\":\"10.1111/jnc.70180\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>The dorsal root ganglion plays a crucial role in sensory transduction and modulation. Nevertheless, the specific physiological functions of the diverse cell types within the dorsal root ganglion remain poorly understood. Here, three physiologic mouse dorsal root ganglion data (GSE155622) were obtained from the NCBI database, yielding data on a total of 14 902 cells. Based on the genetic profiles, we identified neurons, immune cells, fibroblasts, satellite glial cells, Schwann cells, vascular endothelial cells, and vascular smooth muscle cells. Our results found functional enrichment of each cell subtype utilizing QuSAGE, GO, and KEGG enrichment methodologies, determined the evolutionary trajectories of cell subtypes through pseudo-temporal analysis, and constructed a comprehensive cellular communication network. Furthermore, RNAscope in situ hybridization and ISH-IHC double staining were performed to verify the expression of marker genes and itch-related genes in DRG tissues of C57BL/6 mice with no treatment. In summary, our findings reveal cellular heterogeneity in mouse dorsal root ganglion, which offers novel insights into the physiology of mice.</p>\",\"PeriodicalId\":16527,\"journal\":{\"name\":\"Journal of Neurochemistry\",\"volume\":\"169 8\",\"pages\":\"e70180\"},\"PeriodicalIF\":4.0000,\"publicationDate\":\"2025-08-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Neurochemistry\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.1111/jnc.70180\",\"RegionNum\":3,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"BIOCHEMISTRY & MOLECULAR BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Neurochemistry","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1111/jnc.70180","RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
Single Cell Sequencing Reveals Cellular Heterogeneity in Mouse Dorsal Root Ganglion.
The dorsal root ganglion plays a crucial role in sensory transduction and modulation. Nevertheless, the specific physiological functions of the diverse cell types within the dorsal root ganglion remain poorly understood. Here, three physiologic mouse dorsal root ganglion data (GSE155622) were obtained from the NCBI database, yielding data on a total of 14 902 cells. Based on the genetic profiles, we identified neurons, immune cells, fibroblasts, satellite glial cells, Schwann cells, vascular endothelial cells, and vascular smooth muscle cells. Our results found functional enrichment of each cell subtype utilizing QuSAGE, GO, and KEGG enrichment methodologies, determined the evolutionary trajectories of cell subtypes through pseudo-temporal analysis, and constructed a comprehensive cellular communication network. Furthermore, RNAscope in situ hybridization and ISH-IHC double staining were performed to verify the expression of marker genes and itch-related genes in DRG tissues of C57BL/6 mice with no treatment. In summary, our findings reveal cellular heterogeneity in mouse dorsal root ganglion, which offers novel insights into the physiology of mice.
期刊介绍:
Journal of Neurochemistry focuses on molecular, cellular and biochemical aspects of the nervous system, the pathogenesis of neurological disorders and the development of disease specific biomarkers. It is devoted to the prompt publication of original findings of the highest scientific priority and value that provide novel mechanistic insights, represent a clear advance over previous studies and have the potential to generate exciting future research.