将育种者有效数量与种群随机性联系起来的理论框架。

IF 5.1 3区 生物学 Q2 GENETICS & HEREDITY
Genetics Pub Date : 2025-10-08 DOI:10.1093/genetics/iyaf152
Tetsuya Akita
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引用次数: 0

摘要

有效育种者数(Nb)被广泛用作遗传汇总统计,但其在形成人口变异中的作用仍未得到充分探讨。在这里,我们提出了一个理论框架,通过模拟成年雌性及其后代之间的个体水平关系,将Nb整合到成虫数量(N)的随机招募过程中。我们将招募变异划分为亲本、非亲本和环境因素,并表明由非泊松繁殖引起的人口统计学随机性(用Nb概括)可以放大环境变异。假设性别比例相等且无性别差异,当Nb/N < 0.1时,我们推导出Nb与该放大的近似关系。例如,Nb < 42可以使招聘方差增加5%以上。这种方法的一个关键优势是可以从单个队列收集的遗传数据中估计Nb,使其适用于数据有限或保护优先的系统。我们将该框架应用于来自三个已发表研究(小龙虾、蝾螈和鳟鱼)的六个单队列数据集,证实当Nb < 50时,即使Nb/N > 0.1,非泊松扩增仍然可以检测到。我们的研究框架强调了一种独特的因果途径,通过这种途径,生殖变异的增加导致了人口变异和灭绝风险,特别是在Nb和Nb/N都很小的物种中。这些发现为使用Nb作为与生活史无关的指标来量化人口统计学随机性以及将遗传监测与种群生存力分析联系起来提供了新的理论依据。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
A theoretical framework linking the effective number of breeders to demographic stochasticity in iteroparous species.

The effective number of breeders (Nb) is widely used as a genetic summary statistic, yet its role in shaping demographic variability has remained underexplored. Here, we present a theoretical framework for iteroparous species that integrates Nb into the stochastic recruitment process of the number of adults (N) by modeling individual-level relationships between adult females and their offspring. We partition recruitment variation into parental, non-parental, and environmental components, and show that demographic stochasticity arising from non-Poisson reproduction, summarized by Nb, can amplify environmental variance. Assuming an equal sex ratio and no sex-specific variation, we derive an approximation linking Nb to this amplification when Nb/N<0.1. For instance, Nb<42 can increase recruitment variance by more than 5%. A key advantage of this approach is that Nb can be estimated from genetic data collected from a single cohort, making it applicable in data-limited or conservation-priority systems. We applied the framework to six single-cohort data sets from three published studies (crayfish, salamander, and brook trout), confirming that non-Poisson amplification remains detectable whenever Nb<50, even when Nb/N > 0.1. Our framework highlights a distinct causal pathway by which increased reproductive variance contributes to demographic variability and extinction risk, especially in species where both Nb and Nb/N are small. These findings provide new theoretical justification for using Nb as a life-history-independent metric to quantify demographic stochasticity and connect genetic monitoring with population viability analysis.

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来源期刊
Genetics
Genetics GENETICS & HEREDITY-
CiteScore
6.90
自引率
6.10%
发文量
177
审稿时长
1.5 months
期刊介绍: GENETICS is published by the Genetics Society of America, a scholarly society that seeks to deepen our understanding of the living world by advancing our understanding of genetics. Since 1916, GENETICS has published high-quality, original research presenting novel findings bearing on genetics and genomics. The journal publishes empirical studies of organisms ranging from microbes to humans, as well as theoretical work. While it has an illustrious history, GENETICS has changed along with the communities it serves: it is not your mentor''s journal. The editors make decisions quickly – in around 30 days – without sacrificing the excellence and scholarship for which the journal has long been known. GENETICS is a peer reviewed, peer-edited journal, with an international reach and increasing visibility and impact. All editorial decisions are made through collaboration of at least two editors who are practicing scientists. GENETICS is constantly innovating: expanded types of content include Reviews, Commentary (current issues of interest to geneticists), Perspectives (historical), Primers (to introduce primary literature into the classroom), Toolbox Reviews, plus YeastBook, FlyBook, and WormBook (coming spring 2016). For particularly time-sensitive results, we publish Communications. As part of our mission to serve our communities, we''ve published thematic collections, including Genomic Selection, Multiparental Populations, Mouse Collaborative Cross, and the Genetics of Sex.
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