一个可解释的基于mri的预测p53-异常子宫内膜癌的栖息地放射组学模型的开发和验证:一项多中心可行性研究。

Wentao Jin, Hao Zhang, Yan Ning, Xiaojun Chen, Guofu Zhang, Haiming Li, He Zhang
{"title":"一个可解释的基于mri的预测p53-异常子宫内膜癌的栖息地放射组学模型的开发和验证:一项多中心可行性研究。","authors":"Wentao Jin, Hao Zhang, Yan Ning, Xiaojun Chen, Guofu Zhang, Haiming Li, He Zhang","doi":"10.1007/s10278-025-01631-2","DOIUrl":null,"url":null,"abstract":"<p><p>We developed an MRI-based habitat radiomics model (HRM) to predict p53-abnormal (p53abn) molecular subtypes of endometrial cancer (EC). Patients with pathologically confirmed EC were retrospectively enrolled from three hospitals and categorized into a training cohort (n = 270), test cohort 1 (n = 70), and test cohort 2 (n = 154). The tumour was divided into habitat sub-regions using diffusion-weighted imaging (DWI) and contrast-enhanced (CE) images with the K-means algorithm. Radiomics features were extracted from T1-weighted imaging (T1WI), T2-weighted imaging (T2WI), DWI, and CE images. Three machine learning classifiers-logistic regression, support vector machines, and random forests-were applied to develop predictive models for p53abn EC. Model performance was validated using receiver operating characteristic (ROC) curves, and the model with the best predictive performance was selected as the HRM. A whole-region radiomics model (WRM) was also constructed, and a clinical model (CM) with five clinical features was developed. The SHApley Additive ExPlanations (SHAP) method was used to explain the outputs of the models. DeLong's test evaluated and compared the performance across the cohorts. A total of 1920 habitat radiomics features were considered. Eight features were selected for the HRM, ten for the WRM, and three clinical features for the CM. The HRM achieved the highest AUC: 0.855 (training), 0.769 (test1), and 0.766 (test2). The AUCs of the WRM were 0.707 (training), 0.703 (test1), and 0.738 (test2). The AUCs of the CM were 0.709 (training), 0.641 (test1), and 0.665 (test2). The MRI-based HRM successfully predicted p53abn EC. The results indicate that habitat combined with machine learning, radiomics, and SHAP can effectively predict p53abn EC, providing clinicians with intuitive insights and interpretability regarding the impact of risk factors in the model.</p>","PeriodicalId":516858,"journal":{"name":"Journal of imaging informatics in medicine","volume":" ","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2025-08-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Development and Validation of an Explainable MRI-Based Habitat Radiomics Model for Predicting p53-Abnormal Endometrial Cancer: A Multicentre Feasibility Study.\",\"authors\":\"Wentao Jin, Hao Zhang, Yan Ning, Xiaojun Chen, Guofu Zhang, Haiming Li, He Zhang\",\"doi\":\"10.1007/s10278-025-01631-2\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>We developed an MRI-based habitat radiomics model (HRM) to predict p53-abnormal (p53abn) molecular subtypes of endometrial cancer (EC). Patients with pathologically confirmed EC were retrospectively enrolled from three hospitals and categorized into a training cohort (n = 270), test cohort 1 (n = 70), and test cohort 2 (n = 154). The tumour was divided into habitat sub-regions using diffusion-weighted imaging (DWI) and contrast-enhanced (CE) images with the K-means algorithm. Radiomics features were extracted from T1-weighted imaging (T1WI), T2-weighted imaging (T2WI), DWI, and CE images. Three machine learning classifiers-logistic regression, support vector machines, and random forests-were applied to develop predictive models for p53abn EC. Model performance was validated using receiver operating characteristic (ROC) curves, and the model with the best predictive performance was selected as the HRM. A whole-region radiomics model (WRM) was also constructed, and a clinical model (CM) with five clinical features was developed. The SHApley Additive ExPlanations (SHAP) method was used to explain the outputs of the models. DeLong's test evaluated and compared the performance across the cohorts. A total of 1920 habitat radiomics features were considered. Eight features were selected for the HRM, ten for the WRM, and three clinical features for the CM. The HRM achieved the highest AUC: 0.855 (training), 0.769 (test1), and 0.766 (test2). The AUCs of the WRM were 0.707 (training), 0.703 (test1), and 0.738 (test2). The AUCs of the CM were 0.709 (training), 0.641 (test1), and 0.665 (test2). The MRI-based HRM successfully predicted p53abn EC. The results indicate that habitat combined with machine learning, radiomics, and SHAP can effectively predict p53abn EC, providing clinicians with intuitive insights and interpretability regarding the impact of risk factors in the model.</p>\",\"PeriodicalId\":516858,\"journal\":{\"name\":\"Journal of imaging informatics in medicine\",\"volume\":\" \",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2025-08-04\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of imaging informatics in medicine\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1007/s10278-025-01631-2\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of imaging informatics in medicine","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1007/s10278-025-01631-2","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

摘要

我们建立了一个基于mri的栖息地放射组学模型(HRM)来预测子宫内膜癌(EC)的p53-异常(p53abn)分子亚型。从三家医院回顾性纳入病理证实的EC患者,并将其分为培训队列(n = 270)、试验队列1 (n = 70)和试验队列2 (n = 154)。使用扩散加权成像(DWI)和K-means算法的对比度增强(CE)图像将肿瘤划分为栖息地亚区。从t1加权成像(T1WI)、t2加权成像(T2WI)、DWI和CE图像中提取放射组学特征。三种机器学习分类器-逻辑回归,支持向量机和随机森林-被应用于开发p53abn EC的预测模型。采用受试者工作特征(ROC)曲线验证模型的性能,选择预测性能最好的模型作为人力资源管理。构建了全区域放射组学模型(WRM),建立了具有5个临床特征的临床模型(CM)。使用SHApley加性解释(SHAP)方法来解释模型的输出。DeLong的测试评估并比较了整个队列的表现。总共考虑了1920个栖息地放射组学特征。HRM选择了8个特征,WRM选择了10个特征,CM选择了3个临床特征。人力资源管理达到了最高的AUC: 0.855(训练),0.769 (test1)和0.766 (test2)。WRM的auc分别为0.707 (training)、0.703 (test1)和0.738 (test2)。CM的auc分别为0.709 (training)、0.641 (test1)和0.665 (test2)。基于mri的HRM成功预测了p53abn EC。结果表明,habitat结合机器学习、放射组学和SHAP可以有效预测p53abn EC,为临床医生提供了关于模型中危险因素影响的直观见解和可解释性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Development and Validation of an Explainable MRI-Based Habitat Radiomics Model for Predicting p53-Abnormal Endometrial Cancer: A Multicentre Feasibility Study.

We developed an MRI-based habitat radiomics model (HRM) to predict p53-abnormal (p53abn) molecular subtypes of endometrial cancer (EC). Patients with pathologically confirmed EC were retrospectively enrolled from three hospitals and categorized into a training cohort (n = 270), test cohort 1 (n = 70), and test cohort 2 (n = 154). The tumour was divided into habitat sub-regions using diffusion-weighted imaging (DWI) and contrast-enhanced (CE) images with the K-means algorithm. Radiomics features were extracted from T1-weighted imaging (T1WI), T2-weighted imaging (T2WI), DWI, and CE images. Three machine learning classifiers-logistic regression, support vector machines, and random forests-were applied to develop predictive models for p53abn EC. Model performance was validated using receiver operating characteristic (ROC) curves, and the model with the best predictive performance was selected as the HRM. A whole-region radiomics model (WRM) was also constructed, and a clinical model (CM) with five clinical features was developed. The SHApley Additive ExPlanations (SHAP) method was used to explain the outputs of the models. DeLong's test evaluated and compared the performance across the cohorts. A total of 1920 habitat radiomics features were considered. Eight features were selected for the HRM, ten for the WRM, and three clinical features for the CM. The HRM achieved the highest AUC: 0.855 (training), 0.769 (test1), and 0.766 (test2). The AUCs of the WRM were 0.707 (training), 0.703 (test1), and 0.738 (test2). The AUCs of the CM were 0.709 (training), 0.641 (test1), and 0.665 (test2). The MRI-based HRM successfully predicted p53abn EC. The results indicate that habitat combined with machine learning, radiomics, and SHAP can effectively predict p53abn EC, providing clinicians with intuitive insights and interpretability regarding the impact of risk factors in the model.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信