肺栓塞人工智能辅助注释肺通气灌注显像(VQ4PEDB)大型数据库的构建

IF 1.4
Amir Jabbarpour, Eric Moulton, Sanaz Kaviani, Siraj Ghassel, Wanzhen Zeng, Ramin Akbarian, Anne Couture, Aubert Roy, Richard Liu, Yousif A Lucinian, Nuha Hejji, Sukainah AlSulaiman, Farnaz Shirazi, Eugene Leung, Sierra Bonsall, Samir Arfin, Bruce G Gray, Ran Klein
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引用次数: 0

摘要

导论:通气灌注(V/Q)核显像仍然是评估肺栓塞(PE)和其他肺部疾病的重要诊断工具。这些图像的解读需要特定的专业知识,这些专业知识可能受益于人工智能(AI)的最新进展,以提高诊断的准确性和报告的信心。我们的研究旨在开发一个多中心数据集,结合影像学和临床报告,以帮助创建用于PE诊断的人工智能模型。方法:我们建立了一个全面的影像学登记处,包括患者水平的V/Q图像数据以及相关的临床报告、CTPA图像、DVT超声印象、d -二聚体实验室检查和血栓形成单位记录。在加拿大的两家医院和美国的多个地点进行了数据提取,随后进行了严格的去识别过程。我们利用V7 Darwin平台对V/Q图像进行众包标注,包括分割V/Q错配血管缺陷。然后将标注的数据输入到基于sql的数据库Deep Lake中,用于人工智能模型训练。质量保证包括人工检查和算法验证。结果:对渥太华医院的数据仓库进行查询,随后进行初始数据筛选,得到2137项V/Q研究,其中2238项成功检索为DICOM研究。其他贡献包括来自多伦多大学健康中心的600项研究和私人公司Segmed Inc.的385项研究,共获得3122张V/Q平面和SPECT图像。大多数研究使用西门子、飞利浦和GE扫描仪,遵循标准化的局部成像协议。在对来自渥太华医院的1500项研究进行注释后,该分析确定了138项高概率研究,168项中等概率研究,266项低概率研究,244项极低概率研究,669项正常灌注和15项正常灌注的反向不匹配通气缺陷研究。1500例患者中有3511例节段性血管灌注缺损。结论:VQ4PEDB由8种独特的通气剂和11种独特的扫描仪组成。VQ4PEDB数据库在PE的V/Q核闪烁成像领域的深度和广度是独一无二的,包括临床报告,成像研究和注释。我们分享在处理与数据检索、去标识化和注释相关的挑战方面的经验。VQ4PEDB将成为开发和验证诊断肺心病和其他肺部疾病的人工智能模型的宝贵资源。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

On the construction of a large-scale database of AI-assisted annotating lung ventilation-perfusion scintigraphy for pulmonary embolism (VQ4PEDB).

On the construction of a large-scale database of AI-assisted annotating lung ventilation-perfusion scintigraphy for pulmonary embolism (VQ4PEDB).

On the construction of a large-scale database of AI-assisted annotating lung ventilation-perfusion scintigraphy for pulmonary embolism (VQ4PEDB).

On the construction of a large-scale database of AI-assisted annotating lung ventilation-perfusion scintigraphy for pulmonary embolism (VQ4PEDB).

Introduction: Ventilation-perfusion (V/Q) nuclear scintigraphy remains a vital diagnostic tool for assessing pulmonary embolism (PE) and other lung conditions. Interpretation of these images requires specific expertise which may benefit from recent advances in artificial intelligence (AI) to improve diagnostic accuracy and confidence in reporting. Our study aims to develop a multi-center dataset combining imaging and clinical reports to aid in creating AI models for PE diagnosis.

Methods: We established a comprehensive imaging registry encompassing patient-level V/Q image data along with relevant clinical reports, CTPA images, DVT ultrasound impressions, D-dimer lab tests, and thrombosis unit records. Data extraction was performed at two hospitals in Canada and at multiple sites in the United States, followed by a rigorous de-identification process. We utilized the V7 Darwin platform for crowdsourced annotation of V/Q images including segmentation of V/Q mismatched vascular defects. The annotated data was then ingested into Deep Lake, a SQL-based database, for AI model training. Quality assurance involved manual inspections and algorithmic validation.

Results: A query of The Ottawa Hospital's data warehouse followed by initial data screening yielded 2,137 V/Q studies with 2,238 successfully retrieved as DICOM studies. Additional contributions included 600 studies from University Health Toronto, and 385 studies by private company Segmed Inc. resulting in a total of 3,122 V/Q planar and SPECT images. The majority of studies were acquired using Siemens, Philips, and GE scanners, adhering to standardized local imaging protocols. After annotating 1,500 studies from The Ottawa Hospital, the analysis identified 138 high-probability, 168 intermediate-probability, 266 low-probability, 244 very low-probability, and 669 normal, and 15 normal perfusion with reversed mismatched ventilation defect studies. In 1,500 patients were 3,511 segmented vascular perfusion defects.

Conclusion: The VQ4PEDB comprised 8 unique ventilation agents and 11 unique scanners. The VQ4PEDB database is unique in its depth and breadth in the domain of V/Q nuclear scintigraphy for PE, comprising clinical reports, imaging studies, and annotations. We share our experience in addressing challenges associated with data retrieval, de-identification, and annotation. VQ4PEDB will be a valuable resource to development and validate AI models for diagnosing PE and other pulmonary diseases.

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