{"title":"验证就是你所需要的:为零射击临床编码提示大型语言模型。","authors":"Shaoxin Li, Can Zheng, Jiaxiang Wu, Qinwei Xu, Xingkun Xu, Hanyang Wang, Yingkai Sun, Zhian Bai, Yuchen Xu, Lifeng Zhu, Weiguo Hu, Feiyue Huang","doi":"10.1109/JBHI.2025.3593028","DOIUrl":null,"url":null,"abstract":"<p><p>Clinical coding translates medical information from Electronic Health Records (EHRs) into structured codes such as ICD-10, which are essential for healthcare applications. Advances in deep learning and natural language processing have enabled automatic ICD coding models to achieve notable accuracy metrics on in-domain datasets when adequately trained. However, the scarcity of clinical medical texts and the variability across different datasets pose significant challenges, making it difficult for current state-of-the-art models to ensure robust generalization performance across diverse data distributions. Recent advances in Large Language Models (LLMs), such as GPT-4o, have shown great generalization capabilities across general domains and potential in medical information processing tasks. However, their performance in generating clinical codes remains suboptimal. In this study, we propose a novel ICD coding paradigm based on code verification to leverage the capabilities of LLMs. Instead of directly generating accurate codes from a vast code space, we simplify the task by verifying the code assignment from a given candidate set. Through extensive experiments, we demonstrate that LLMs function more effectively as code verifiers rather than code generators, with GPT-4o achieving the best performance on the CodiEsp dataset under zero-shot settings. Furthermore, our results indicate that LLM-based systems can perform on par with state-of-the-art clinical coding systems while offering superior generalizability across institutions, languages, and ICD versions.</p>","PeriodicalId":13073,"journal":{"name":"IEEE Journal of Biomedical and Health Informatics","volume":"PP ","pages":""},"PeriodicalIF":6.8000,"publicationDate":"2025-07-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Verification is All You Need: Prompting Large Language Models for Zero-Shot Clinical Coding.\",\"authors\":\"Shaoxin Li, Can Zheng, Jiaxiang Wu, Qinwei Xu, Xingkun Xu, Hanyang Wang, Yingkai Sun, Zhian Bai, Yuchen Xu, Lifeng Zhu, Weiguo Hu, Feiyue Huang\",\"doi\":\"10.1109/JBHI.2025.3593028\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Clinical coding translates medical information from Electronic Health Records (EHRs) into structured codes such as ICD-10, which are essential for healthcare applications. Advances in deep learning and natural language processing have enabled automatic ICD coding models to achieve notable accuracy metrics on in-domain datasets when adequately trained. However, the scarcity of clinical medical texts and the variability across different datasets pose significant challenges, making it difficult for current state-of-the-art models to ensure robust generalization performance across diverse data distributions. Recent advances in Large Language Models (LLMs), such as GPT-4o, have shown great generalization capabilities across general domains and potential in medical information processing tasks. However, their performance in generating clinical codes remains suboptimal. In this study, we propose a novel ICD coding paradigm based on code verification to leverage the capabilities of LLMs. Instead of directly generating accurate codes from a vast code space, we simplify the task by verifying the code assignment from a given candidate set. Through extensive experiments, we demonstrate that LLMs function more effectively as code verifiers rather than code generators, with GPT-4o achieving the best performance on the CodiEsp dataset under zero-shot settings. Furthermore, our results indicate that LLM-based systems can perform on par with state-of-the-art clinical coding systems while offering superior generalizability across institutions, languages, and ICD versions.</p>\",\"PeriodicalId\":13073,\"journal\":{\"name\":\"IEEE Journal of Biomedical and Health Informatics\",\"volume\":\"PP \",\"pages\":\"\"},\"PeriodicalIF\":6.8000,\"publicationDate\":\"2025-07-28\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"IEEE Journal of Biomedical and Health Informatics\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://doi.org/10.1109/JBHI.2025.3593028\",\"RegionNum\":2,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"COMPUTER SCIENCE, INFORMATION SYSTEMS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"IEEE Journal of Biomedical and Health Informatics","FirstCategoryId":"5","ListUrlMain":"https://doi.org/10.1109/JBHI.2025.3593028","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"COMPUTER SCIENCE, INFORMATION SYSTEMS","Score":null,"Total":0}
Verification is All You Need: Prompting Large Language Models for Zero-Shot Clinical Coding.
Clinical coding translates medical information from Electronic Health Records (EHRs) into structured codes such as ICD-10, which are essential for healthcare applications. Advances in deep learning and natural language processing have enabled automatic ICD coding models to achieve notable accuracy metrics on in-domain datasets when adequately trained. However, the scarcity of clinical medical texts and the variability across different datasets pose significant challenges, making it difficult for current state-of-the-art models to ensure robust generalization performance across diverse data distributions. Recent advances in Large Language Models (LLMs), such as GPT-4o, have shown great generalization capabilities across general domains and potential in medical information processing tasks. However, their performance in generating clinical codes remains suboptimal. In this study, we propose a novel ICD coding paradigm based on code verification to leverage the capabilities of LLMs. Instead of directly generating accurate codes from a vast code space, we simplify the task by verifying the code assignment from a given candidate set. Through extensive experiments, we demonstrate that LLMs function more effectively as code verifiers rather than code generators, with GPT-4o achieving the best performance on the CodiEsp dataset under zero-shot settings. Furthermore, our results indicate that LLM-based systems can perform on par with state-of-the-art clinical coding systems while offering superior generalizability across institutions, languages, and ICD versions.
期刊介绍:
IEEE Journal of Biomedical and Health Informatics publishes original papers presenting recent advances where information and communication technologies intersect with health, healthcare, life sciences, and biomedicine. Topics include acquisition, transmission, storage, retrieval, management, and analysis of biomedical and health information. The journal covers applications of information technologies in healthcare, patient monitoring, preventive care, early disease diagnosis, therapy discovery, and personalized treatment protocols. It explores electronic medical and health records, clinical information systems, decision support systems, medical and biological imaging informatics, wearable systems, body area/sensor networks, and more. Integration-related topics like interoperability, evidence-based medicine, and secure patient data are also addressed.