Fernanda Mata-Salgado , Alan Morales-Ortiz , Cesar Millan-Pacheco , Nina Pastor , Lina Rivillas-Acevedo
{"title":"Zn(II)在6aJL2R24G蛋白聚集中的作用:实验和理论方法","authors":"Fernanda Mata-Salgado , Alan Morales-Ortiz , Cesar Millan-Pacheco , Nina Pastor , Lina Rivillas-Acevedo","doi":"10.1016/j.jinorgbio.2025.113012","DOIUrl":null,"url":null,"abstract":"<div><div>Light chain amyloidosis is a conformational disease, and one of the most common systemic amyloidosis. It is characterized by the deposition of amyloid aggregates of immunoglobulin light chains in organs and tissues. 6aJL2R24G is a recombinant variant of the λ6a germline protein, a germline present in 25 % of the amyloid-associated λ6a light chain amyloidosis cases. In this study, using spectroscopic and computational methodologies, we found that the interaction of this protein with Zn(II) accelerates amyloid fibril initiation and slows down elongation, without altering the fiber morphology. Also, neither the thermal stability nor the secondary structure are altered by the interaction with the metal ion, as measured by circular dichroism. Isothermal calorimetry titration showed that the protein has two binding sites with affinities in the micromolar range. Molecular dynamics simulations suggest that the interaction between 6aJL2R24G and Zn(II) destabilizes strand A, strand G and the EF loop, making the protein more prone to initiate the formation of amyloid fibers. Furthermore, models of 6aJL2R24G dimers and tetramers with Zn(II) suggest that Zn(II) promotes the association of the proteins, involving histidine, aspartate, and glutamate residues, with multiple different geometries, effectively raising the local protein concentration and promoting seed formation, but adopting conformations different from the one required for further monomer addition to the fiber.</div></div>","PeriodicalId":364,"journal":{"name":"Journal of Inorganic Biochemistry","volume":"272 ","pages":"Article 113012"},"PeriodicalIF":3.2000,"publicationDate":"2025-07-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Role of Zn(II) in the aggregation of the 6aJL2R24G protein: Experimental and theoretical approach\",\"authors\":\"Fernanda Mata-Salgado , Alan Morales-Ortiz , Cesar Millan-Pacheco , Nina Pastor , Lina Rivillas-Acevedo\",\"doi\":\"10.1016/j.jinorgbio.2025.113012\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>Light chain amyloidosis is a conformational disease, and one of the most common systemic amyloidosis. It is characterized by the deposition of amyloid aggregates of immunoglobulin light chains in organs and tissues. 6aJL2R24G is a recombinant variant of the λ6a germline protein, a germline present in 25 % of the amyloid-associated λ6a light chain amyloidosis cases. In this study, using spectroscopic and computational methodologies, we found that the interaction of this protein with Zn(II) accelerates amyloid fibril initiation and slows down elongation, without altering the fiber morphology. Also, neither the thermal stability nor the secondary structure are altered by the interaction with the metal ion, as measured by circular dichroism. Isothermal calorimetry titration showed that the protein has two binding sites with affinities in the micromolar range. Molecular dynamics simulations suggest that the interaction between 6aJL2R24G and Zn(II) destabilizes strand A, strand G and the EF loop, making the protein more prone to initiate the formation of amyloid fibers. Furthermore, models of 6aJL2R24G dimers and tetramers with Zn(II) suggest that Zn(II) promotes the association of the proteins, involving histidine, aspartate, and glutamate residues, with multiple different geometries, effectively raising the local protein concentration and promoting seed formation, but adopting conformations different from the one required for further monomer addition to the fiber.</div></div>\",\"PeriodicalId\":364,\"journal\":{\"name\":\"Journal of Inorganic Biochemistry\",\"volume\":\"272 \",\"pages\":\"Article 113012\"},\"PeriodicalIF\":3.2000,\"publicationDate\":\"2025-07-23\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Inorganic Biochemistry\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0162013425001928\",\"RegionNum\":2,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"BIOCHEMISTRY & MOLECULAR BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Inorganic Biochemistry","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0162013425001928","RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
Role of Zn(II) in the aggregation of the 6aJL2R24G protein: Experimental and theoretical approach
Light chain amyloidosis is a conformational disease, and one of the most common systemic amyloidosis. It is characterized by the deposition of amyloid aggregates of immunoglobulin light chains in organs and tissues. 6aJL2R24G is a recombinant variant of the λ6a germline protein, a germline present in 25 % of the amyloid-associated λ6a light chain amyloidosis cases. In this study, using spectroscopic and computational methodologies, we found that the interaction of this protein with Zn(II) accelerates amyloid fibril initiation and slows down elongation, without altering the fiber morphology. Also, neither the thermal stability nor the secondary structure are altered by the interaction with the metal ion, as measured by circular dichroism. Isothermal calorimetry titration showed that the protein has two binding sites with affinities in the micromolar range. Molecular dynamics simulations suggest that the interaction between 6aJL2R24G and Zn(II) destabilizes strand A, strand G and the EF loop, making the protein more prone to initiate the formation of amyloid fibers. Furthermore, models of 6aJL2R24G dimers and tetramers with Zn(II) suggest that Zn(II) promotes the association of the proteins, involving histidine, aspartate, and glutamate residues, with multiple different geometries, effectively raising the local protein concentration and promoting seed formation, but adopting conformations different from the one required for further monomer addition to the fiber.
期刊介绍:
The Journal of Inorganic Biochemistry is an established international forum for research in all aspects of Biological Inorganic Chemistry. Original papers of a high scientific level are published in the form of Articles (full length papers), Short Communications, Focused Reviews and Bioinorganic Methods. Topics include: the chemistry, structure and function of metalloenzymes; the interaction of inorganic ions and molecules with proteins and nucleic acids; the synthesis and properties of coordination complexes of biological interest including both structural and functional model systems; the function of metal- containing systems in the regulation of gene expression; the role of metals in medicine; the application of spectroscopic methods to determine the structure of metallobiomolecules; the preparation and characterization of metal-based biomaterials; and related systems. The emphasis of the Journal is on the structure and mechanism of action of metallobiomolecules.