个性化和不确定性意识冠状动脉血流动力学模拟:从贝叶斯估计到改进的多保真度不确定性量化

IF 4.8 2区 医学 Q1 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS
Karthik Menon , Andrea Zanoni , M. Owais Khan , Gianluca Geraci , Koen Nieman , Daniele E. Schiavazzi , Alison L. Marsden
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引用次数: 0

摘要

背景:与单纯依赖解剖成像相比,无创冠状动脉血流动力学模拟改善了冠状动脉疾病的临床风险分层和治疗结果。然而,模拟通常使用经验方法来分布冠状动脉树中动脉之间的总冠状动脉流量,这忽略了患者的可变性、疾病的存在和其他临床因素。此外,临床数据的不确定性通常在建模管道中未被考虑。目的:我们提出了一个端到端的不确定性感知管道(1)通过结合血管特异性冠状动脉血流和心功能来个性化冠状动脉血流模拟;(2)在考虑临床数据不确定性的情况下,以更高的精度预测临床和生物力学量。方法:我们从临床CT心肌灌注成像中吸收患者特异性心肌血流量测量来估计分支特异性冠状动脉流量。采用自适应马尔可夫链蒙特卡罗采样方法,利用临床数据中的模拟噪声估计模型参数的联合后验分布。此外,使用一种将多保真蒙特卡罗估计与非线性数据驱动降维相结合的新方法确定了相关量的后验预测分布。这导致高保真度和低保真度模型输出之间的相关性得到改善。结果:我们的框架准确地概括了临床测量的心功能以及测量噪声不确定性下的分支特异性冠状动脉血流。我们观察到,与单保真蒙特卡罗估计和最先进的多保真蒙特卡罗方法相比,估计兴趣量的置信区间大幅减少。这尤其适用于低保真度和高保真度模型预测之间相关性有限的兴趣量。此外,在特定的置信水平或方差下,所提出的多保真蒙特卡罗估计比传统估计的计算成本要低得多。结论:提出的个性化和不确定性预测冠状动脉血流动力学的管道是基于常规临床测量和最近开发的CT心肌灌注成像技术。所提出的管道在精度和降低计算成本方面有显著提高。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Personalized and uncertainty-aware coronary hemodynamics simulations: From Bayesian estimation to improved multi-fidelity uncertainty quantification

Background:

Non-invasive simulations of coronary hemodynamics have improved clinical risk stratification and treatment outcomes for coronary artery disease, compared to relying on anatomical imaging alone. However, simulations typically use empirical approaches to distribute total coronary flow amongst the arteries in the coronary tree, which ignores patient variability, the presence of disease, and other clinical factors. Further, uncertainty in the clinical data often remains unaccounted for in the modeling pipeline.

Objective:

We present an end-to-end uncertainty-aware pipeline to (1) personalize coronary flow simulations by incorporating vessel-specific coronary flows as well as cardiac function; and (2) predict clinical and biomechanical quantities of interest with improved precision, while accounting for uncertainty in the clinical data.

Methods:

We assimilate patient-specific measurements of myocardial blood flow from clinical CT myocardial perfusion imaging to estimate branch-specific coronary artery flows. Simulated noise in the clinical data is used to estimate the joint posterior distributions of the model parameters using adaptive Markov Chain Monte Carlo sampling. Additionally, the posterior predictive distribution for the relevant quantities of interest is determined using a new approach combining multi-fidelity Monte Carlo estimation with non-linear, data-driven dimensionality reduction. This leads to improved correlations between high- and low-fidelity model outputs.

Results:

Our framework accurately recapitulates clinically measured cardiac function as well as branch-specific coronary flows under measurement noise uncertainty. We observe substantial reductions in confidence intervals for estimated quantities of interest compared to single-fidelity Monte Carlo estimation and state-of-the-art multi-fidelity Monte Carlo methods. This holds especially true for quantities of interest that showed limited correlation between the low- and high-fidelity model predictions. In addition, the proposed multi-fidelity Monte Carlo estimators are significantly cheaper to compute than traditional estimators, under a specified confidence level or variance.

Conclusions:

The proposed pipeline for personalized and uncertainty-aware predictions of coronary hemodynamics is based on routine clinical measurements and recently developed techniques for CT myocardial perfusion imaging. The proposed pipeline offers significant improvements in precision and reduction in computational cost.
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来源期刊
Computer methods and programs in biomedicine
Computer methods and programs in biomedicine 工程技术-工程:生物医学
CiteScore
12.30
自引率
6.60%
发文量
601
审稿时长
135 days
期刊介绍: To encourage the development of formal computing methods, and their application in biomedical research and medical practice, by illustration of fundamental principles in biomedical informatics research; to stimulate basic research into application software design; to report the state of research of biomedical information processing projects; to report new computer methodologies applied in biomedical areas; the eventual distribution of demonstrable software to avoid duplication of effort; to provide a forum for discussion and improvement of existing software; to optimize contact between national organizations and regional user groups by promoting an international exchange of information on formal methods, standards and software in biomedicine. Computer Methods and Programs in Biomedicine covers computing methodology and software systems derived from computing science for implementation in all aspects of biomedical research and medical practice. It is designed to serve: biochemists; biologists; geneticists; immunologists; neuroscientists; pharmacologists; toxicologists; clinicians; epidemiologists; psychiatrists; psychologists; cardiologists; chemists; (radio)physicists; computer scientists; programmers and systems analysts; biomedical, clinical, electrical and other engineers; teachers of medical informatics and users of educational software.
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