Giulio Pisaneschi , Francesco Paolo Salzo , Pierpaolo Serio , Witold Pedrycz
{"title":"基于规则建模的可解释流行病状态估计","authors":"Giulio Pisaneschi , Francesco Paolo Salzo , Pierpaolo Serio , Witold Pedrycz","doi":"10.1016/j.cmpb.2025.108963","DOIUrl":null,"url":null,"abstract":"<div><h3>Background and Objective:</h3><div>Epidemiological data is, by its very own nature, associated with noise and incompleteness, posing a significant challenge to extracting meaningful insights. To address this limitation, we propose a novel framework that seamlessly integrates fuzzy logic and machine learning techniques to provide a reliable understanding of the aforementioned data. Fuzzy logic, with its inherent ability to handle vagueness and imprecision, proves invaluable in interpreting noisy epidemiological data.</div></div><div><h3>Methods:</h3><div>Our approach introduces a novel perspective by departing from a dynamical epidemic model, which encodes comprehensive prior knowledge of epidemic dynamics, to create a credible context for our predictive task. This facilitates model’s outputs interpretability, while maintaining its credibility. Within this environment, we aim to detect relevant parts of the system state that are implicitly encoded in other state variables, by looking at observable variables of the epidemic state.</div></div><div><h3>Results:</h3><div>The Takagi–Sugeno model demonstrated robust predictive accuracy across varying Signal-Noise Ratio levels, achieving comparable performance to neural networks while maintaining interpretability, with significant advantages in noisy data scenarios, as evidenced by lower Root Mean Squared Errors under worst-case conditions (low SNRs).</div></div><div><h3>Conclusions:</h3><div>This study introduces a robust and interpretable hybrid framework for epidemic forecasting, demonstrating reliable estimation of the effective reproduction number through fuzzy clustering and Takagi–Sugeno modeling, even under noisy conditions. The method effectively addresses data uncertainty and demonstrates strong performance under noisy conditions, offering a promising approach for applications requiring both transparency and reliability in predictive modeling.</div></div>","PeriodicalId":10624,"journal":{"name":"Computer methods and programs in biomedicine","volume":"271 ","pages":"Article 108963"},"PeriodicalIF":4.8000,"publicationDate":"2025-07-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Interpretable epidemic state estimation via rule based modeling\",\"authors\":\"Giulio Pisaneschi , Francesco Paolo Salzo , Pierpaolo Serio , Witold Pedrycz\",\"doi\":\"10.1016/j.cmpb.2025.108963\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><h3>Background and Objective:</h3><div>Epidemiological data is, by its very own nature, associated with noise and incompleteness, posing a significant challenge to extracting meaningful insights. To address this limitation, we propose a novel framework that seamlessly integrates fuzzy logic and machine learning techniques to provide a reliable understanding of the aforementioned data. Fuzzy logic, with its inherent ability to handle vagueness and imprecision, proves invaluable in interpreting noisy epidemiological data.</div></div><div><h3>Methods:</h3><div>Our approach introduces a novel perspective by departing from a dynamical epidemic model, which encodes comprehensive prior knowledge of epidemic dynamics, to create a credible context for our predictive task. This facilitates model’s outputs interpretability, while maintaining its credibility. Within this environment, we aim to detect relevant parts of the system state that are implicitly encoded in other state variables, by looking at observable variables of the epidemic state.</div></div><div><h3>Results:</h3><div>The Takagi–Sugeno model demonstrated robust predictive accuracy across varying Signal-Noise Ratio levels, achieving comparable performance to neural networks while maintaining interpretability, with significant advantages in noisy data scenarios, as evidenced by lower Root Mean Squared Errors under worst-case conditions (low SNRs).</div></div><div><h3>Conclusions:</h3><div>This study introduces a robust and interpretable hybrid framework for epidemic forecasting, demonstrating reliable estimation of the effective reproduction number through fuzzy clustering and Takagi–Sugeno modeling, even under noisy conditions. The method effectively addresses data uncertainty and demonstrates strong performance under noisy conditions, offering a promising approach for applications requiring both transparency and reliability in predictive modeling.</div></div>\",\"PeriodicalId\":10624,\"journal\":{\"name\":\"Computer methods and programs in biomedicine\",\"volume\":\"271 \",\"pages\":\"Article 108963\"},\"PeriodicalIF\":4.8000,\"publicationDate\":\"2025-07-26\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Computer methods and programs in biomedicine\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0169260725003803\",\"RegionNum\":2,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Computer methods and programs in biomedicine","FirstCategoryId":"5","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0169260725003803","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS","Score":null,"Total":0}
Interpretable epidemic state estimation via rule based modeling
Background and Objective:
Epidemiological data is, by its very own nature, associated with noise and incompleteness, posing a significant challenge to extracting meaningful insights. To address this limitation, we propose a novel framework that seamlessly integrates fuzzy logic and machine learning techniques to provide a reliable understanding of the aforementioned data. Fuzzy logic, with its inherent ability to handle vagueness and imprecision, proves invaluable in interpreting noisy epidemiological data.
Methods:
Our approach introduces a novel perspective by departing from a dynamical epidemic model, which encodes comprehensive prior knowledge of epidemic dynamics, to create a credible context for our predictive task. This facilitates model’s outputs interpretability, while maintaining its credibility. Within this environment, we aim to detect relevant parts of the system state that are implicitly encoded in other state variables, by looking at observable variables of the epidemic state.
Results:
The Takagi–Sugeno model demonstrated robust predictive accuracy across varying Signal-Noise Ratio levels, achieving comparable performance to neural networks while maintaining interpretability, with significant advantages in noisy data scenarios, as evidenced by lower Root Mean Squared Errors under worst-case conditions (low SNRs).
Conclusions:
This study introduces a robust and interpretable hybrid framework for epidemic forecasting, demonstrating reliable estimation of the effective reproduction number through fuzzy clustering and Takagi–Sugeno modeling, even under noisy conditions. The method effectively addresses data uncertainty and demonstrates strong performance under noisy conditions, offering a promising approach for applications requiring both transparency and reliability in predictive modeling.
期刊介绍:
To encourage the development of formal computing methods, and their application in biomedical research and medical practice, by illustration of fundamental principles in biomedical informatics research; to stimulate basic research into application software design; to report the state of research of biomedical information processing projects; to report new computer methodologies applied in biomedical areas; the eventual distribution of demonstrable software to avoid duplication of effort; to provide a forum for discussion and improvement of existing software; to optimize contact between national organizations and regional user groups by promoting an international exchange of information on formal methods, standards and software in biomedicine.
Computer Methods and Programs in Biomedicine covers computing methodology and software systems derived from computing science for implementation in all aspects of biomedical research and medical practice. It is designed to serve: biochemists; biologists; geneticists; immunologists; neuroscientists; pharmacologists; toxicologists; clinicians; epidemiologists; psychiatrists; psychologists; cardiologists; chemists; (radio)physicists; computer scientists; programmers and systems analysts; biomedical, clinical, electrical and other engineers; teachers of medical informatics and users of educational software.