医疗保健知识图谱综述:资源、应用程序和承诺。

IF 4.5 2区 医学 Q2 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS
Hejie Cui , Jiaying Lu , Ran Xu , Shiyu Wang , Wenjing Ma , Yue Yu , Shaojun Yu , Xuan Kan , Chen Ling , Liang Zhao , Zhaohui S. Qin , Joyce C. Ho , Tianfan Fu , Jing Ma , Mengdi Huai , Fei Wang , Carl Yang
{"title":"医疗保健知识图谱综述:资源、应用程序和承诺。","authors":"Hejie Cui ,&nbsp;Jiaying Lu ,&nbsp;Ran Xu ,&nbsp;Shiyu Wang ,&nbsp;Wenjing Ma ,&nbsp;Yue Yu ,&nbsp;Shaojun Yu ,&nbsp;Xuan Kan ,&nbsp;Chen Ling ,&nbsp;Liang Zhao ,&nbsp;Zhaohui S. Qin ,&nbsp;Joyce C. Ho ,&nbsp;Tianfan Fu ,&nbsp;Jing Ma ,&nbsp;Mengdi Huai ,&nbsp;Fei Wang ,&nbsp;Carl Yang","doi":"10.1016/j.jbi.2025.104861","DOIUrl":null,"url":null,"abstract":"<div><h3>Objective:</h3><div>This comprehensive review aims to provide an overview of the current state of Healthcare Knowledge Graphs (HKGs), including their construction, utilization models, and applications across various healthcare and biomedical research domains.</div></div><div><h3>Methods:</h3><div>We thoroughly analyzed existing literature on HKGs, covering their construction methodologies, utilization techniques, and applications in basic science research, pharmaceutical research and development, clinical decision support, and public health. The review encompasses both model-free and model-based utilization approaches and the integration of HKGs with large language models (LLMs).</div></div><div><h3>Results:</h3><div>We searched Google Scholar for relevant papers on HKGs and classified them into the following topics: HKG construction, HKG utilization, and their downstream applications in various domains. We also discussed their special challenges and the promise for future work.</div></div><div><h3>Discussion:</h3><div>The review highlights the potential of HKGs to significantly impact biomedical research and clinical practice by integrating vast amounts of biomedical knowledge from multiple domains. The synergy between HKGs and LLMs offers promising opportunities for constructing more comprehensive knowledge graphs and improving the accuracy of healthcare applications.</div></div><div><h3>Conclusions:</h3><div>HKGs have emerged as a powerful tool for structuring medical knowledge, with broad applications across biomedical research, clinical decision-making, and public health. This survey serves as a roadmap for future research and development in the field of HKGs, highlighting the potential of combining knowledge graphs with advanced machine learning models for healthcare transformation.</div></div>","PeriodicalId":15263,"journal":{"name":"Journal of Biomedical Informatics","volume":"169 ","pages":"Article 104861"},"PeriodicalIF":4.5000,"publicationDate":"2025-07-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"A review on knowledge graphs for healthcare: Resources, applications, and promises\",\"authors\":\"Hejie Cui ,&nbsp;Jiaying Lu ,&nbsp;Ran Xu ,&nbsp;Shiyu Wang ,&nbsp;Wenjing Ma ,&nbsp;Yue Yu ,&nbsp;Shaojun Yu ,&nbsp;Xuan Kan ,&nbsp;Chen Ling ,&nbsp;Liang Zhao ,&nbsp;Zhaohui S. Qin ,&nbsp;Joyce C. Ho ,&nbsp;Tianfan Fu ,&nbsp;Jing Ma ,&nbsp;Mengdi Huai ,&nbsp;Fei Wang ,&nbsp;Carl Yang\",\"doi\":\"10.1016/j.jbi.2025.104861\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><h3>Objective:</h3><div>This comprehensive review aims to provide an overview of the current state of Healthcare Knowledge Graphs (HKGs), including their construction, utilization models, and applications across various healthcare and biomedical research domains.</div></div><div><h3>Methods:</h3><div>We thoroughly analyzed existing literature on HKGs, covering their construction methodologies, utilization techniques, and applications in basic science research, pharmaceutical research and development, clinical decision support, and public health. The review encompasses both model-free and model-based utilization approaches and the integration of HKGs with large language models (LLMs).</div></div><div><h3>Results:</h3><div>We searched Google Scholar for relevant papers on HKGs and classified them into the following topics: HKG construction, HKG utilization, and their downstream applications in various domains. We also discussed their special challenges and the promise for future work.</div></div><div><h3>Discussion:</h3><div>The review highlights the potential of HKGs to significantly impact biomedical research and clinical practice by integrating vast amounts of biomedical knowledge from multiple domains. The synergy between HKGs and LLMs offers promising opportunities for constructing more comprehensive knowledge graphs and improving the accuracy of healthcare applications.</div></div><div><h3>Conclusions:</h3><div>HKGs have emerged as a powerful tool for structuring medical knowledge, with broad applications across biomedical research, clinical decision-making, and public health. This survey serves as a roadmap for future research and development in the field of HKGs, highlighting the potential of combining knowledge graphs with advanced machine learning models for healthcare transformation.</div></div>\",\"PeriodicalId\":15263,\"journal\":{\"name\":\"Journal of Biomedical Informatics\",\"volume\":\"169 \",\"pages\":\"Article 104861\"},\"PeriodicalIF\":4.5000,\"publicationDate\":\"2025-07-23\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Biomedical Informatics\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S1532046425000905\",\"RegionNum\":2,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Biomedical Informatics","FirstCategoryId":"3","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1532046425000905","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS","Score":null,"Total":0}
引用次数: 0

摘要

目的:本文综述了医疗保健知识图谱(HKGs)的现状,包括其构建、使用模型以及在各个医疗保健和生物医学研究领域的应用。方法:对现有的HKGs文献进行全面分析,涵盖HKGs的构建方法、利用技术以及在基础科学研究、药物研发、临床决策支持和公共卫生等方面的应用。该综述包括无模型和基于模型的使用方法,以及将hkg与大型语言模型(llm)相结合。结果:我们在谷歌Scholar上检索了有关HKG的相关论文,并将其分类为:HKG的构建、HKG的利用以及HKG在各个领域的下游应用。我们还讨论了他们面临的特殊挑战和未来工作的前景。讨论:回顾强调了HKGs通过整合多个领域的大量生物医学知识,对生物医学研究和临床实践产生重大影响的潜力。HKGs和llm之间的协同作用为构建更全面的知识图谱和提高医疗保健应用程序的准确性提供了有希望的机会。结论:HKGs已成为构建医学知识的强大工具,在生物医学研究、临床决策和公共卫生领域有着广泛的应用。这项调查为未来香港医疗保健领域的研究和发展提供了路线图,强调了将知识图谱与先进的机器学习模型结合起来进行医疗保健转型的潜力。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

A review on knowledge graphs for healthcare: Resources, applications, and promises

A review on knowledge graphs for healthcare: Resources, applications, and promises

Objective:

This comprehensive review aims to provide an overview of the current state of Healthcare Knowledge Graphs (HKGs), including their construction, utilization models, and applications across various healthcare and biomedical research domains.

Methods:

We thoroughly analyzed existing literature on HKGs, covering their construction methodologies, utilization techniques, and applications in basic science research, pharmaceutical research and development, clinical decision support, and public health. The review encompasses both model-free and model-based utilization approaches and the integration of HKGs with large language models (LLMs).

Results:

We searched Google Scholar for relevant papers on HKGs and classified them into the following topics: HKG construction, HKG utilization, and their downstream applications in various domains. We also discussed their special challenges and the promise for future work.

Discussion:

The review highlights the potential of HKGs to significantly impact biomedical research and clinical practice by integrating vast amounts of biomedical knowledge from multiple domains. The synergy between HKGs and LLMs offers promising opportunities for constructing more comprehensive knowledge graphs and improving the accuracy of healthcare applications.

Conclusions:

HKGs have emerged as a powerful tool for structuring medical knowledge, with broad applications across biomedical research, clinical decision-making, and public health. This survey serves as a roadmap for future research and development in the field of HKGs, highlighting the potential of combining knowledge graphs with advanced machine learning models for healthcare transformation.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Journal of Biomedical Informatics
Journal of Biomedical Informatics 医学-计算机:跨学科应用
CiteScore
8.90
自引率
6.70%
发文量
243
审稿时长
32 days
期刊介绍: The Journal of Biomedical Informatics reflects a commitment to high-quality original research papers, reviews, and commentaries in the area of biomedical informatics methodology. Although we publish articles motivated by applications in the biomedical sciences (for example, clinical medicine, health care, population health, and translational bioinformatics), the journal emphasizes reports of new methodologies and techniques that have general applicability and that form the basis for the evolving science of biomedical informatics. Articles on medical devices; evaluations of implemented systems (including clinical trials of information technologies); or papers that provide insight into a biological process, a specific disease, or treatment options would generally be more suitable for publication in other venues. Papers on applications of signal processing and image analysis are often more suitable for biomedical engineering journals or other informatics journals, although we do publish papers that emphasize the information management and knowledge representation/modeling issues that arise in the storage and use of biological signals and images. System descriptions are welcome if they illustrate and substantiate the underlying methodology that is the principal focus of the report and an effort is made to address the generalizability and/or range of application of that methodology. Note also that, given the international nature of JBI, papers that deal with specific languages other than English, or with country-specific health systems or approaches, are acceptable for JBI only if they offer generalizable lessons that are relevant to the broad JBI readership, regardless of their country, language, culture, or health system.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信