基于GEO数据库生物信息学筛选铅致急性肾损伤中铁中毒中心基因及实验验证。

IF 2.8 4区 医学 Q3 TOXICOLOGY
Xin Fang, Shidi Gao, Le Zhang, Jingyu Gao, Ting Li, Chaofan Wang, Jiayunzhu Xu, Chenxu Li, Rifeng Lu, Li Guo
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引用次数: 0

摘要

本研究旨在通过生物信息学和动物实验的方法探讨嗜铁相关基因在铅诱导的急性肾损伤(AKI)中的作用,为今后的研究提供新的方向。通过数据库鉴定铁下垂介导的铅诱导AKI相关差异表达基因。随后,通过富集和蛋白相互作用分析鉴定了枢纽基因。采用Western blot和免疫组化方法验证hub基因和铁下沉标记蛋白GPX4的表达,并检测组织中Fe2+、GSH、MDA水平。利用DSigDB数据库和分子对接进行药物预测。筛选中心基因:血红素加氧酶1 (HMOX1)、CD44分子(CD44)、花生四烯酸15-脂氧合酶(ALOX15)和NADPH醌脱氢酶1 (NQO1)。在600 mg/kg醋酸铅诱导的AKI大鼠模型中,肾组织中HMOX1、CD44、NQO1和谷胱甘肽过氧化物酶4 (GPX4)蛋白水平显著降低,ALOX15蛋白水平升高。此外,Fe2+和丙二醛水平显著升高,还原谷胱甘肽水平下降;潜在的治疗药物可能包括白藜芦醇、维甲酸、丙戊酸和叔丁基对苯二酚。我们的研究揭示了铅暴露与铁中毒相关基因(HMOX1、CD44、ALOX15和NQO1)失调之间的关联。我们假设这些基因改变可能导致铁下垂和随后的AKI。进一步的研究需要更大的样本量和额外的实验验证。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Screening Hub Genes of Ferroptosis in Pb-Induced Acute Kidney Injury Based on GEO Database Bioinformatics and Experimental Validation.

This study aimed to explore the role of ferroptosis-related genes in Pb-induced acute kidney injury (AKI) using bioinformatics and animal experiments, potentially providing a new direction for future research. Differentially expressed genes related to Pb-induced AKI mediated by ferroptosis were identified using databases. Subsequently, hub genes were identified through enrichment and protein-protein interaction analyses. Western blot and immunohistochemistry were used to verify the expression of hub genes and ferroptosis marker protein GPX4, and the levels of Fe2+, GSH, and MDA in tissues were determined. Drug prediction was performed using the DSigDB database and molecular docking. The hub genes were screened: heme oxygenase 1 (HMOX1), CD44 molecule (CD44), arachidonate 15-lipoxygenase (ALOX15), and NADPH quinone dehydrogenase 1 (NQO1). In 600 mg/kg lead acetate-induced AKI rat models, kidney tissues exhibited significantly lower levels of HMOX1, CD44, NQO1, and glutathione peroxidase 4 (GPX4) proteins, while showing higher levels of ALOX15 protein. Furthermore, significantly elevated levels of Fe2+ and malondialdehyde were observed, accompanied by decreased levels of reduced glutathione; potential therapeutic drugs may include resveratrol, retinoic acid, valproic acid, and tert-butylhydroquinone. Our study reveals an association between Pb exposure and the dysregulation of ferroptosis-related genes (HMOX1, CD44, ALOX15, and NQO1). We hypothesize that these genetic alterations may contribute to ferroptosis and subsequent AKI. Further research with larger sample sizes and additional experimental validation is needed.

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来源期刊
CiteScore
7.00
自引率
6.10%
发文量
145
审稿时长
1 months
期刊介绍: Journal of Applied Toxicology publishes peer-reviewed original reviews and hypothesis-driven research articles on mechanistic, fundamental and applied research relating to the toxicity of drugs and chemicals at the molecular, cellular, tissue, target organ and whole body level in vivo (by all relevant routes of exposure) and in vitro / ex vivo. All aspects of toxicology are covered (including but not limited to nanotoxicology, genomics and proteomics, teratogenesis, carcinogenesis, mutagenesis, reproductive and endocrine toxicology, toxicopathology, target organ toxicity, systems toxicity (eg immunotoxicity), neurobehavioral toxicology, mechanistic studies, biochemical and molecular toxicology, novel biomarkers, pharmacokinetics/PBPK, risk assessment and environmental health studies) and emphasis is given to papers of clear application to human health, and/or advance mechanistic understanding and/or provide significant contributions and impact to their field.
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