Zana S. Afandi , Tarek A. Yousef , Ahmed S.M. Al-Janabi , Christoph Wagner , Ahmed S. Faihan , Ramy A. Bedier , Hela Ferjani , Abdullah Al-Dakhil , Saad Shaaban , Subhi A. Al-Jibori
{"title":"单聚和二聚钯环配合物的探索:[Pd(PPh3)(bhquin)(sac)]的光谱、生物学、分子对接和x射线晶体结构","authors":"Zana S. Afandi , Tarek A. Yousef , Ahmed S.M. Al-Janabi , Christoph Wagner , Ahmed S. Faihan , Ramy A. Bedier , Hela Ferjani , Abdullah Al-Dakhil , Saad Shaaban , Subhi A. Al-Jibori","doi":"10.1016/j.jorganchem.2025.123774","DOIUrl":null,"url":null,"abstract":"<div><div>Novel cyclometalated palladium(ІІ) complexes type mono nuclear [Pd(PPh<sub>3</sub>)(bhquin)(sac)](2) (PPh<sub>3</sub>= triphenylphosphine) and binuclear [Pd<sub>2</sub>(sac)<sub>2</sub>(µ-p^p)(bhquin)<sub>2</sub>] (3–7) (p^<em>p</em> = Ph<sub>2</sub>PCH<sub>2</sub>PPh<sub>2</sub> (dppm), Ph<sub>2</sub>P(CH<sub>2</sub>)<sub>2</sub>PPh<sub>2</sub> (dppe), Ph<sub>2</sub>P(CH<sub>2</sub>)<sub>3</sub>PPh<sub>2</sub> (dppp), Ph<sub>2</sub>P(CH<sub>2</sub>)<sub>4</sub>PPh<sub>2</sub> (dppb), (Ph<sub>2</sub>PC<sub>5</sub>H<sub>4</sub>)<sub>2</sub>Fe (dppf) were obtained from the reaction of the binuclear saccharinato complex [Pd(µ-sac)bhquin]<sub>2</sub> (1) (sac = saccharinate, bhquin= deprotonated benzoquinolate ) reacts with one-mole diphosphine or two mole of mono phosphine ligands, respectively. It is worth noting that in complexes 3, 4, and 5, a nitrogen atom of one molecule bhquinuin is trans to the phosphorus atom of the diphosphine, and the other molecule carbon of bhquin is trans to the phosphorus atom of the diphosphine. On the other hand, in complexes 6 and 7, the nitrogen atom of bhquin is trans to the phosphorus atom of the diphosphine. The new complexes were characterized by electric conductance, elemental analysis, and different spectroscopic methods (IR, <sup>1</sup>H-, <sup>31</sup>P-NMR) as well as X-ray crystallography. A comparison between the bond lengths and angles was calculated using Density Functional Theory (DFT). Molecular docking studies were also performed to assay the antibacterial potential of the prepared compounds.</div></div>","PeriodicalId":374,"journal":{"name":"Journal of Organometallic Chemistry","volume":"1039 ","pages":"Article 123774"},"PeriodicalIF":2.1000,"publicationDate":"2025-07-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Exploration of monomeric and dimeric palladacyles complexes: Spectroscopic, biological, molecular docking and X-ray crystal structures of [Pd(PPh3)(bhquin)(sac)]\",\"authors\":\"Zana S. Afandi , Tarek A. Yousef , Ahmed S.M. Al-Janabi , Christoph Wagner , Ahmed S. Faihan , Ramy A. Bedier , Hela Ferjani , Abdullah Al-Dakhil , Saad Shaaban , Subhi A. Al-Jibori\",\"doi\":\"10.1016/j.jorganchem.2025.123774\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>Novel cyclometalated palladium(ІІ) complexes type mono nuclear [Pd(PPh<sub>3</sub>)(bhquin)(sac)](2) (PPh<sub>3</sub>= triphenylphosphine) and binuclear [Pd<sub>2</sub>(sac)<sub>2</sub>(µ-p^p)(bhquin)<sub>2</sub>] (3–7) (p^<em>p</em> = Ph<sub>2</sub>PCH<sub>2</sub>PPh<sub>2</sub> (dppm), Ph<sub>2</sub>P(CH<sub>2</sub>)<sub>2</sub>PPh<sub>2</sub> (dppe), Ph<sub>2</sub>P(CH<sub>2</sub>)<sub>3</sub>PPh<sub>2</sub> (dppp), Ph<sub>2</sub>P(CH<sub>2</sub>)<sub>4</sub>PPh<sub>2</sub> (dppb), (Ph<sub>2</sub>PC<sub>5</sub>H<sub>4</sub>)<sub>2</sub>Fe (dppf) were obtained from the reaction of the binuclear saccharinato complex [Pd(µ-sac)bhquin]<sub>2</sub> (1) (sac = saccharinate, bhquin= deprotonated benzoquinolate ) reacts with one-mole diphosphine or two mole of mono phosphine ligands, respectively. It is worth noting that in complexes 3, 4, and 5, a nitrogen atom of one molecule bhquinuin is trans to the phosphorus atom of the diphosphine, and the other molecule carbon of bhquin is trans to the phosphorus atom of the diphosphine. On the other hand, in complexes 6 and 7, the nitrogen atom of bhquin is trans to the phosphorus atom of the diphosphine. The new complexes were characterized by electric conductance, elemental analysis, and different spectroscopic methods (IR, <sup>1</sup>H-, <sup>31</sup>P-NMR) as well as X-ray crystallography. A comparison between the bond lengths and angles was calculated using Density Functional Theory (DFT). Molecular docking studies were also performed to assay the antibacterial potential of the prepared compounds.</div></div>\",\"PeriodicalId\":374,\"journal\":{\"name\":\"Journal of Organometallic Chemistry\",\"volume\":\"1039 \",\"pages\":\"Article 123774\"},\"PeriodicalIF\":2.1000,\"publicationDate\":\"2025-07-17\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Organometallic Chemistry\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0022328X25002670\",\"RegionNum\":3,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"CHEMISTRY, INORGANIC & NUCLEAR\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Organometallic Chemistry","FirstCategoryId":"92","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0022328X25002670","RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"CHEMISTRY, INORGANIC & NUCLEAR","Score":null,"Total":0}
Exploration of monomeric and dimeric palladacyles complexes: Spectroscopic, biological, molecular docking and X-ray crystal structures of [Pd(PPh3)(bhquin)(sac)]
Novel cyclometalated palladium(ІІ) complexes type mono nuclear [Pd(PPh3)(bhquin)(sac)](2) (PPh3= triphenylphosphine) and binuclear [Pd2(sac)2(µ-p^p)(bhquin)2] (3–7) (p^p = Ph2PCH2PPh2 (dppm), Ph2P(CH2)2PPh2 (dppe), Ph2P(CH2)3PPh2 (dppp), Ph2P(CH2)4PPh2 (dppb), (Ph2PC5H4)2Fe (dppf) were obtained from the reaction of the binuclear saccharinato complex [Pd(µ-sac)bhquin]2 (1) (sac = saccharinate, bhquin= deprotonated benzoquinolate ) reacts with one-mole diphosphine or two mole of mono phosphine ligands, respectively. It is worth noting that in complexes 3, 4, and 5, a nitrogen atom of one molecule bhquinuin is trans to the phosphorus atom of the diphosphine, and the other molecule carbon of bhquin is trans to the phosphorus atom of the diphosphine. On the other hand, in complexes 6 and 7, the nitrogen atom of bhquin is trans to the phosphorus atom of the diphosphine. The new complexes were characterized by electric conductance, elemental analysis, and different spectroscopic methods (IR, 1H-, 31P-NMR) as well as X-ray crystallography. A comparison between the bond lengths and angles was calculated using Density Functional Theory (DFT). Molecular docking studies were also performed to assay the antibacterial potential of the prepared compounds.
期刊介绍:
The Journal of Organometallic Chemistry targets original papers dealing with theoretical aspects, structural chemistry, synthesis, physical and chemical properties (including reaction mechanisms), and practical applications of organometallic compounds.
Organometallic compounds are defined as compounds that contain metal - carbon bonds. The term metal includes all alkali and alkaline earth metals, all transition metals and the lanthanides and actinides in the Periodic Table. Metalloids including the elements in Group 13 and the heavier members of the Groups 14 - 16 are also included. The term chemistry includes syntheses, characterizations and reaction chemistry of all such compounds. Research reports based on use of organometallic complexes in bioorganometallic chemistry, medicine, material sciences, homogeneous catalysis and energy conversion are also welcome.
The scope of the journal has been enlarged to encompass important research on organometallic complexes in bioorganometallic chemistry and material sciences, and of heavier main group elements in organometallic chemistry. The journal also publishes review articles, short communications and notes.