使用直接甲基组测序探索表观遗传衰老。

IF 3.5 Q3 GENETICS & HEREDITY
Elena-Cristina Găitănaru, Roua Gabriela Popescu, Andreea-Angelica Stroe, Sergiu Emil Georgescu, George Cătălin Marinescu
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引用次数: 0

摘要

背景/目的:纳米孔测序技术的进步为单碱基甲基化研究开辟了新的途径,但其在表观遗传衰老研究中的应用仍不发达。方法:我们提出了一个新的框架,利用纳米孔测序的独特能力来分析和解释天然DNA中与年龄相关的甲基化模式。结果:与传统的基于阵列的方法不同,长reads测序捕获完整的CpG上下文,适应多样化和重复的基因组区域,去除亚硫酸盐转化步骤,并且与最新的参考基因组兼容。结论:这项工作建立了纳米孔测序作为下一代表观遗传衰老研究的强大工具,为抗衰老干预监测和纵向衰老研究提供了一个可扩展和生物丰富的平台。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Exploring Epigenetic Ageing Using Direct Methylome Sequencing.

Background/Objectives: Advances in nanopore sequencing have opened new avenues for studying DNA methylation at single-base resolution, yet their application in epigenetic ageing research remains underdeveloped. Methods: We present a novel framework that leverages the unique capabilities of nanopore sequencing to profile and interpret age-associated methylation patterns in native DNA. Results: Unlike conventional array-based approaches, long reads sequencing captures full CpG context, accommodates diverse and repetitive genomic regions, removes bisulfite conversion steps, and is compatible to the latest reference genome. Conclusions: This work establishes nanopore sequencing as a powerful tool for next-generation epigenetic ageing studies, offering a scalable and biologically rich platform for anti-ageing interventions monitoring and longitudinal ageing studies.

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来源期刊
Epigenomes
Epigenomes GENETICS & HEREDITY-
CiteScore
3.80
自引率
0.00%
发文量
38
审稿时长
11 weeks
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