M. Harshavarthini , Edward Inpent Campal , Shubra Singh , Nalini Poojary , Martin Xavier , Kiran D. Rasal , Madhuri S. Pathak , Naresh S. Nagpure
{"title":"一种经济快速的彗星测定和微核细胞组测定法用于蛤蜊遗传毒性生物监测","authors":"M. Harshavarthini , Edward Inpent Campal , Shubra Singh , Nalini Poojary , Martin Xavier , Kiran D. Rasal , Madhuri S. Pathak , Naresh S. Nagpure","doi":"10.1016/j.dnarep.2025.103870","DOIUrl":null,"url":null,"abstract":"<div><div>The comet assay or single-cell gel electrophoresis and the micronucleus cytome assay have emerged as widely used methods for measuring DNA damage and cytotoxicity in genotoxicity testing and biomonitoring studies. The relative occurrence of micronuclei and other cellular abnormalities in dividing cells is a reliable biomarker of xenobiotic-induced genotoxicity. Bivalves are known for their bioaccumulation capabilities and are ideal bioindicators for monitoring DNA damage and chromosomal mutations. This study focuses on the optimization and standardization of genotoxicity assays, such as comet assay and micronucleus test, using forked venus clam, <em>Gafrarium divaricatum</em>, as a model organism. It highlights the potential of using cost-effective mechanical digestion method to prepare cell suspensions from clam tissues, as opposed to the more expensive enzymatic digestion techniques. It also explored the application of various staining techniques to improve the accuracy of micronucleus scoring, addressing the variability in genotoxicity assays across different laboratories. By developing a species specific standardized protocol for these assays, this investigation aimed to reduce inter-laboratory discrepancies and enhance the reliability of genotoxicity testing in marine organisms, especially in bivalves, thereby facilitating regulatory applications and environmental monitoring.</div></div>","PeriodicalId":300,"journal":{"name":"DNA Repair","volume":"152 ","pages":"Article 103870"},"PeriodicalIF":2.7000,"publicationDate":"2025-07-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"An economical and rapid method of comet assay and micronucleus cytome assay for genotoxicity biomonitoring using clam, Gafrarium divaricatum (Gmelin, 1791)\",\"authors\":\"M. Harshavarthini , Edward Inpent Campal , Shubra Singh , Nalini Poojary , Martin Xavier , Kiran D. Rasal , Madhuri S. Pathak , Naresh S. Nagpure\",\"doi\":\"10.1016/j.dnarep.2025.103870\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>The comet assay or single-cell gel electrophoresis and the micronucleus cytome assay have emerged as widely used methods for measuring DNA damage and cytotoxicity in genotoxicity testing and biomonitoring studies. The relative occurrence of micronuclei and other cellular abnormalities in dividing cells is a reliable biomarker of xenobiotic-induced genotoxicity. Bivalves are known for their bioaccumulation capabilities and are ideal bioindicators for monitoring DNA damage and chromosomal mutations. This study focuses on the optimization and standardization of genotoxicity assays, such as comet assay and micronucleus test, using forked venus clam, <em>Gafrarium divaricatum</em>, as a model organism. It highlights the potential of using cost-effective mechanical digestion method to prepare cell suspensions from clam tissues, as opposed to the more expensive enzymatic digestion techniques. It also explored the application of various staining techniques to improve the accuracy of micronucleus scoring, addressing the variability in genotoxicity assays across different laboratories. By developing a species specific standardized protocol for these assays, this investigation aimed to reduce inter-laboratory discrepancies and enhance the reliability of genotoxicity testing in marine organisms, especially in bivalves, thereby facilitating regulatory applications and environmental monitoring.</div></div>\",\"PeriodicalId\":300,\"journal\":{\"name\":\"DNA Repair\",\"volume\":\"152 \",\"pages\":\"Article 103870\"},\"PeriodicalIF\":2.7000,\"publicationDate\":\"2025-07-17\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"DNA Repair\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S1568786425000667\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"GENETICS & HEREDITY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"DNA Repair","FirstCategoryId":"3","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1568786425000667","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
An economical and rapid method of comet assay and micronucleus cytome assay for genotoxicity biomonitoring using clam, Gafrarium divaricatum (Gmelin, 1791)
The comet assay or single-cell gel electrophoresis and the micronucleus cytome assay have emerged as widely used methods for measuring DNA damage and cytotoxicity in genotoxicity testing and biomonitoring studies. The relative occurrence of micronuclei and other cellular abnormalities in dividing cells is a reliable biomarker of xenobiotic-induced genotoxicity. Bivalves are known for their bioaccumulation capabilities and are ideal bioindicators for monitoring DNA damage and chromosomal mutations. This study focuses on the optimization and standardization of genotoxicity assays, such as comet assay and micronucleus test, using forked venus clam, Gafrarium divaricatum, as a model organism. It highlights the potential of using cost-effective mechanical digestion method to prepare cell suspensions from clam tissues, as opposed to the more expensive enzymatic digestion techniques. It also explored the application of various staining techniques to improve the accuracy of micronucleus scoring, addressing the variability in genotoxicity assays across different laboratories. By developing a species specific standardized protocol for these assays, this investigation aimed to reduce inter-laboratory discrepancies and enhance the reliability of genotoxicity testing in marine organisms, especially in bivalves, thereby facilitating regulatory applications and environmental monitoring.
期刊介绍:
DNA Repair provides a forum for the comprehensive coverage of DNA repair and cellular responses to DNA damage. The journal publishes original observations on genetic, cellular, biochemical, structural and molecular aspects of DNA repair, mutagenesis, cell cycle regulation, apoptosis and other biological responses in cells exposed to genomic insult, as well as their relationship to human disease.
DNA Repair publishes full-length research articles, brief reports on research, and reviews. The journal welcomes articles describing databases, methods and new technologies supporting research on DNA repair and responses to DNA damage. Letters to the Editor, hot topics and classics in DNA repair, historical reflections, book reviews and meeting reports also will be considered for publication.