正电子发射断层成像生物标志物和人工智能表征孤立性肺结节。

IF 1.4
Ashish Kumar Jha, Umeshkumar Baburao Sherkhane, Nilendu C Purandare, Leonard Wee, Andre Dekker, Venkatesh Rangarajan
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引用次数: 0

摘要

背景:孤立性肺结节(SPNs)的恶性或良性特征仍然是使用常规影像学参数诊断的挑战。文献建议使用联合正电子发射断层扫描(PET)和计算机断层扫描(CT)来表征SPN。放射组学和机器学习是其他有前途的技术,可以用来表征SPN。目的:本研究探索PET放射组学特征和机器学习算法表征SPN的潜力。方法:本回顾性研究旨在利用PET放射组学表征孤立性肺结节(SPNs)。本研究共纳入163例接受PET/CT成像的患者。使用PyRadiomics从PET图像中提取了1,098个特征。为了优化模型性能,采用了两种策略,即(a)特征选择和(b)特征约简技术,包括层次聚类、特征选择中的RFE和特征约简中的PCA。为了解决结果类别的不平衡,对数据集进行了统计重采样(SMOTE)。利用原始训练集(RF-Model-O和RF-PCA-Model-O)和平衡训练集(RF-Model-B和RF-PCA-Model-B)建立随机森林模型,并在测试数据集上进行验证。此外,还进行了5次交叉验证和bootstrap验证。使用各种指标评估模型的性能,如准确性、AUC、精度、召回率和f1分数。结果:163例患者(年龄36 ~ 76岁,平均年龄58±7岁),恶性117例,肉芽肿或良性46例。在策略(a)中,使用分层聚类和RFE确定了五个放射学特征为最优。在策略(b)中,使用PCA认为五个主成分是最优的。在训练检验验证、5倍交叉验证和自举验证中,RF-Model-O和RF-Model-B的模型精度分别为0.8、0.80±0.07、0.84±1.11和0.8、0.83±0.10、0.80±0.07。同样,在训练检验验证、5倍交叉验证和自举验证中,RF-PCA-Model-O和RF-PCA-Model-B的模型精度分别为0.84、0.80±0.07、0.84±07和策略(b)中的模型精度分别为0.74、0.80±0.08、0.75±0.08。结论:PET放射组学在鉴别spn的良恶性方面表现优异。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Positron emission tomography imaging biomarker and artificial intelligence for the characterization of solitary pulmonary nodule.

Background: The characterization of solitary pulmonary nodules (SPNs) as malignant or benign remains a diagnostic challenge using conventional imaging parameters. The literature suggests using combined Positron Emission Tomography (PET) and Computed Tomography (CT) to characterise a SPN. Radiomics and machine learning are other promising technologies which can be utilised to characterise the SPN.

Purpose: This study explores the potential of PET radiomics signatures and machine learning algorithms to characterise the SPN.

Methods: This retrospective study aimed to characterize solitary pulmonary nodules (SPNs) using PET radiomics. A total of 163 patients who underwent PET/CT imaging were included in this study. A total of 1,098 features were extracted from PET images using PyRadiomics. To optimize model performance two strategies i.e., (a) feature selection and (b) feature reduction techniques were employed, including hierarchical clustering, RFE in feature selection, and PCA in feature reduction. To address outcome class imbalance, the dataset was statistically resampled (SMOTE). A random forest models was developed using original training set (RF-Model-O & RF-PCA-Model-O) and balanced training dataset (RF-Model-B & RF-PCA-Model-B) and validated on the test datasets. Additionally, 5-fold cross-validation and bootstrap validation was also performed. The model's performance was assessed using various metrics, such as accuracy, AUC, precision, recall, and F1-score.

Results: Of the 163 patients (aged 36-76 years, mean age 58 ± 7), 117 had malignant disease and 46 had granulomatous or benign conditions. In Strategy (a), five radiomic features were identified as optimal using hierarchical clustering and RFE. In Strategy (b), five principal components were deemed optimal using PCA. The model accuracy of RF-Model-O and RF-Model-B in the train-test validation, 5-fold cross-validation and bootstrap validation were found to be 0.8, 0.80 ± 0.07, 0.84 ± 1.11 and 0.8, 0.83 ± 0.10, 0.80 ± 0.07 in Strategy (a). Similarly, the model accuracy of RF-PCA-Model-O and RF-PCA-Model-B in the train-test validation, 5-fold cross-validation and bootstrap validation were found to be 0.84, 0.80 ± 0.07, 0.84 ± 07 and 0.74, 0.80 ± 0.08, 0.75 ± 0.08 in Strategy (b).

Conclusion: The PET radiomics demonstrated excellent performance in characterizing SPNs as benign or malignant.

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