选择性N-15和C-13组氨酸标记的代谢前体同位素。

IF 4.7 2区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY
Sven Brüschweiler, Matus Hlavac, Sarah Kratzwald, Julia Schörghuber, Katharina M Siess, Alisa Wimmer, Gerald Platzer, Robert Konrat, Roman J Lichtenecker
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引用次数: 0

摘要

组氨酸是一种多功能残基,具有独特的性质,保证了许多蛋白质的结构和正常功能。它的咪唑侧链是一种理想的化学实体,可以作为酶机制中的质子穿梭体,通过其芳香Pi系统或其阳离子形式控制识别界面,并作为金属阳离子的配位体。这些功能能力受到局部分子环境的调节,从而影响pKa值和互变异构状态。核磁共振波谱已被证明是探测组氨酸不同功能的可靠方法。在这里,我们描述了一种非手性前体的同位素标记变体的合成,以将核磁共振活性13C和/或15N核引入组氨酸侧链。这些化合物被用于选择性标记当前药物发现项目中重要的蛋白靶标,如WD重复蛋白5 (WDR5)、磷脂酶C的Src同源2结构域(PLCγ-SH2)和Kirsten大鼠肉瘤病毒致癌基因(KRAS)的产物。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Isotopologues of a Metabolic Precursor for Selective N-15 and C-13 Histidine Labeling.

Histidine is a versatile residue with distinct properties ensuring many proteins' structure and proper function. Its imidazole side-chain represents an ideal chemical entity to serve as a proton shuttle in enzyme mechanisms, control recognition interfaces either by contribution of its aromatic Pi system or in its cationic form, and acts as a coordinating ligand to metal cations. These functional capabilities are modulated by the local molecular environment, which influences pKa values and tautomeric states. NMR spectroscopy has proven to be a reliable method for probing the distinct functions of histidine. Here, we describe the synthesis of isotopically labeled variants of a non-chiral precursor to introduce NMR active 13C and/or 15N nuclei into histidine side-chains. The compounds were employed to selectively label protein targets of significant interest in current drug discovery programs, such as the WD repeat containing protein 5 (WDR5), the Src homology 2 domain of the phospholipase C (PLCγ-SH2) and the product of the Kirsten rat sarcoma virus oncogene (KRAS).

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来源期刊
Journal of Molecular Biology
Journal of Molecular Biology 生物-生化与分子生物学
CiteScore
11.30
自引率
1.80%
发文量
412
审稿时长
28 days
期刊介绍: Journal of Molecular Biology (JMB) provides high quality, comprehensive and broad coverage in all areas of molecular biology. The journal publishes original scientific research papers that provide mechanistic and functional insights and report a significant advance to the field. The journal encourages the submission of multidisciplinary studies that use complementary experimental and computational approaches to address challenging biological questions. Research areas include but are not limited to: Biomolecular interactions, signaling networks, systems biology; Cell cycle, cell growth, cell differentiation; Cell death, autophagy; Cell signaling and regulation; Chemical biology; Computational biology, in combination with experimental studies; DNA replication, repair, and recombination; Development, regenerative biology, mechanistic and functional studies of stem cells; Epigenetics, chromatin structure and function; Gene expression; Membrane processes, cell surface proteins and cell-cell interactions; Methodological advances, both experimental and theoretical, including databases; Microbiology, virology, and interactions with the host or environment; Microbiota mechanistic and functional studies; Nuclear organization; Post-translational modifications, proteomics; Processing and function of biologically important macromolecules and complexes; Molecular basis of disease; RNA processing, structure and functions of non-coding RNAs, transcription; Sorting, spatiotemporal organization, trafficking; Structural biology; Synthetic biology; Translation, protein folding, chaperones, protein degradation and quality control.
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