铁下垂抑制蛋白1 n -肉豆蔻酰基化尾部活性的变构自调节。

IF 4.7 2区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY
Carlos Ventura, Xiaowei Bogetti, Ji Young Lee, Ivet Bahar
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引用次数: 0

摘要

铁下垂是一种细胞死亡形式,其特征是脂质过氧化物的铁依赖性积累。铁下垂抑制蛋白1 (FSP1)已被证明通过不同的抗氧化途径与谷胱甘肽过氧化物酶4 (GPX4)共同抑制铁下垂。为了更好地了解FSP1的功能和作用机制,人们对其进行了许多研究,但由于缺乏FSP1的结构信息,这些研究仍然没有定论。最近对不同形式的FSP1结构的阐明和对其构象功能变化的计算表征的进展为我们提供了剖析FSP1作用机制的机会,并获得了控制其活性的关键位点和相互作用的见解。我们介绍了FSP1结构协同变化的弹性网络模型分析结果,以及其与脂质双分子层和小分子相互作用的分子动力学模拟结果,以帮助未来开发针对FSP1的铁下垂调节剂。我们的研究揭示了n端肉豆酰化尾在调节配体结合位点的可及性和将FSP1锚定在膜上的关键作用,从而深入了解了FSP1功能的调节机制。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Allosteric Autoregulation of Ferroptosis Suppressor Protein 1 Activity by its N-myristoylated Tail.

Ferroptosis is a form of cell death characterized by iron-dependent accumulation of lipid peroxides. Ferroptosis suppressor protein 1 (FSP1) has been shown to work with glutathione peroxidase 4 (GPX4) to suppress ferroptosis through different antioxidant pathways. Many studies have been conducted on FSP1 to better understand its function and mechanism of action, which remained inconclusive in the absence of structural information on FSP1. Recent elucidation of FSP1 structures in different forms and advances in computational characterization of functional changes in its conformation provide us with the opportunity of dissecting FSP1 mechanism of action and gaining insights into critical sites and interactions that control its activity. We present the results from elastic network model analyses of cooperative changes in FSP1 structure, as well as those from molecular dynamics simulations of its interactions with the lipid bilayer and small molecules, toward assisting in future development of modulators of ferroptosis targeting FSP1. Our study reveals the critical role of N-terminal myristoylated tail in modulating the accessibility of the ligand-binding sites and in anchoring FSP1 to the membrane, giving insights into mechanisms of regulating FSP1 function.

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来源期刊
Journal of Molecular Biology
Journal of Molecular Biology 生物-生化与分子生物学
CiteScore
11.30
自引率
1.80%
发文量
412
审稿时长
28 days
期刊介绍: Journal of Molecular Biology (JMB) provides high quality, comprehensive and broad coverage in all areas of molecular biology. The journal publishes original scientific research papers that provide mechanistic and functional insights and report a significant advance to the field. The journal encourages the submission of multidisciplinary studies that use complementary experimental and computational approaches to address challenging biological questions. Research areas include but are not limited to: Biomolecular interactions, signaling networks, systems biology; Cell cycle, cell growth, cell differentiation; Cell death, autophagy; Cell signaling and regulation; Chemical biology; Computational biology, in combination with experimental studies; DNA replication, repair, and recombination; Development, regenerative biology, mechanistic and functional studies of stem cells; Epigenetics, chromatin structure and function; Gene expression; Membrane processes, cell surface proteins and cell-cell interactions; Methodological advances, both experimental and theoretical, including databases; Microbiology, virology, and interactions with the host or environment; Microbiota mechanistic and functional studies; Nuclear organization; Post-translational modifications, proteomics; Processing and function of biologically important macromolecules and complexes; Molecular basis of disease; RNA processing, structure and functions of non-coding RNAs, transcription; Sorting, spatiotemporal organization, trafficking; Structural biology; Synthetic biology; Translation, protein folding, chaperones, protein degradation and quality control.
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