有或没有N -杂环给体配体的N -(对甲基-苯基)-亚氨基二乙酸(2-)螯合物Ni(II)配合物的水媒合成:超分子结构、分子对接、Hirshfeld表面分析、DFT概述和光学带隙测量。

IF 2.4 3区 化学 Q2 CHEMISTRY, INORGANIC & NUCLEAR
D.K. Patel , D. Choquesillo-Lazarte , J. Niclós-Gutiérrez
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引用次数: 0

摘要

在水介质中,羟基碳酸镍与N -(对甲基-苯乙基)-亚氨基二乙酸(H2MEpheida)进行化学计量反应,得到二元配合物[Ni(MEpheida)(H2O)3](1)的绿色晶体,H2MEpheida、Ni(II)盐和Him分别以1:1:3的比例加入咪唑(Him)配体,生成三元配合物[Ni(MEpheida)(Him)2(H2O)]·2H2O(2)。对合成的金属配合物进行了各种分析、光谱、核磁共振、红外光谱、紫外-可见等表征。、热重法和单晶x射线衍射技术。配合物(1)与相关三元配合物(2)的晶体模式不同可归因于n -杂环配体的连接。通过单晶x射线分析,仔细观察了Ni(II)离子周围扭曲的八面体几何形状。由此推测,在配合物(1)和(2)中,螯合物的IDA(亚氨基二乙酸酯(2-))臂均采用面no2构象。此外,利用能量框架和Hirshfeld表面分析来仔细检查独特的分子间力,特别是氢键相互作用,二维指纹图和超分子结构。利用TD-DFT /B3LYP分子模拟过程,获得了不同的几何优化参数,以及HOMO-LUMO、分子静电势(MEP)、频率计算等相关参数,以支持实验结果。此外,我们还对H2MEpheida及其对应的Ni(II)金属配合物(1)和(2)在CAII活性位点(PDB代码:1CNX)进行了分子对接研究,预测了它们在靶碳酸酐酶II酶活性位点可能的相互作用模式,并利用BIOVIA Discovery Studio 2024程序通过受体-配体相互作用对AutoDock Vina结果进行了进一步可视化和完善。此外,利用Tauc方程αhν = A(ν - Eg)r,其中间接电子跃迁r = 1 / 2,直接电子跃迁r = 2,利用紫外-可见吸收数据估计了H2MEpheida及其相应的Ni(II)二元和三元配合物的带隙能(Eg)。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Aqueous media synthesis of Ni(II) complexes of N–(p–methyl–phenethyl)–iminodiacetate(2-) chelate with or without N–heterocyclic donor ligands: Supramolecular architectures, molecular docking, Hirshfeld surfaces analysis, DFT overview and optical bandgap measurements.

Aqueous media synthesis of Ni(II) complexes of N–(p–methyl–phenethyl)–iminodiacetate(2-) chelate with or without N–heterocyclic donor ligands: Supramolecular architectures, molecular docking, Hirshfeld surfaces analysis, DFT overview and optical bandgap measurements.
The stoichiometric reactions between nickel(II) hydroxy–carbonate and N–(p–methyl–phenethyl)–iminodiacetic acid (H2MEpheida) in aqueous media give greenish color crystal of binary complex [Ni(MEpheida)(H2O)3] (1) which turns on ternary complex [Ni(MEpheida)(Him)2(H2O)]·2H2O (2) on addition of imidazole (Him) ligand in the ratio of 1:1:3 for H2MEpheida, Ni(II) salt and Him respectively. The synthesized metal complexes have been characterized by various analytical, spectroscopic viz., 1HNMR, FTIR, UV–vis., thermogravimetry and single–crystal X–ray diffraction techniques. The crystal pattern of complex (1) differs from the related ternary complex (2) can be attributed to the ligation of N–heterocyclic ligands. The distorted octahedral geometry around the Ni(II) ion scrutinized through the single crystal X–ray analysis. As speculated, the IDA (Iminodiacetate(2-)) arm of chelate adopted fac–NO2 conformation in both complexes (1) and (2). Furthermore, energy frameworks and Hirshfeld surface analysis has been utilized to scrutinized the unique intermolecular forces, specifically H–bonding interactions, 2D fingerprint plots, and supramolecular architecture. The molecular simulation processes using TD–DFT/B3LYP were employed to obtain the distinguished geometry optimizations and other related parameters viz., HOMO–LUMO, molecular electrostatic potential (MEP), frequency calculations in order to support the experimental findings. Moreover, molecular docking studies have been carried out for H2MEpheida and their corresponding Ni(II) metal complexes (1) and (2) in the active site of CAII (PDB code: 1CNX) to predict their possible interaction mode in the active site of target carbonic anhydrase II enzyme and AutoDock Vina results were further visualized and refined through receptor-ligand interactions using BIOVIA Discovery Studio 2024 program. Additionally, Tauc's equation, αhν = A(hν–Eg)r, where r = ½ for indirect and 2 for direct electronic transitions, was employed to estimate the bandgap energy (Eg) for H2MEpheida and their corresponding Ni(II) binary and ternary complexes using UV–vis absorption data.
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来源期刊
Polyhedron
Polyhedron 化学-晶体学
CiteScore
4.90
自引率
7.70%
发文量
515
审稿时长
2 months
期刊介绍: Polyhedron publishes original, fundamental, experimental and theoretical work of the highest quality in all the major areas of inorganic chemistry. This includes synthetic chemistry, coordination chemistry, organometallic chemistry, bioinorganic chemistry, and solid-state and materials chemistry. Papers should be significant pieces of work, and all new compounds must be appropriately characterized. The inclusion of single-crystal X-ray structural data is strongly encouraged, but papers reporting only the X-ray structure determination of a single compound will usually not be considered. Papers on solid-state or materials chemistry will be expected to have a significant molecular chemistry component (such as the synthesis and characterization of the molecular precursors and/or a systematic study of the use of different precursors or reaction conditions) or demonstrate a cutting-edge application (for example inorganic materials for energy applications). Papers dealing only with stability constants are not considered.
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