{"title":"具有“坏”反射的好数据:在o -乙基n-苯基氨基甲酸酯结构的再测定中使用非球形散射因子。","authors":"Peter G Jones","doi":"10.1107/S2053229625005959","DOIUrl":null,"url":null,"abstract":"<p><p>The structure of O-ethyl N-phenylthiocarbamate, C<sub>9</sub>H<sub>11</sub>NOS (2), has been redetermined, confirming the results obtained in three earlier structure determinations. The higher data quality provided by modern diffractomers has enabled a reliable analysis (absent from the earlier reports) of the hydrogen bonding. However, conventional refinement of the structure of 2 was unsatisfactory because of the large number of extremely badly-fitting reflections, leading to many checkCIF `ALERT A' messages that might be detrimental to ease of publication. A refinement using nonspherical scattering factors effectively eliminated this problem. There are three independent molecules of 2 in the asymmetric unit; two are directly connected by two N-H...S hydrogen bonds, forming a dimer with the well-known R<sub>2</sub><sup>2</sup>(8) motif. The other molecule forms a topologically identical but inversion-symmetric dimer. Each type of dimer occupies a different region parallel to the ac plane (molecule 1, y ≃ 0; molecules 2 and 3, y ≃ 1/3 and 2/3). All three molecules lie in planes parallel to (031). The title compound is effectively isotypic to 1-ethyl-3-phenylthiourea (another known structure for which the hydrogen bonding was not analysed) because its EtNH group, like the EtO group of 2, is not involved in hydrogen bonding.</p>","PeriodicalId":7115,"journal":{"name":"Acta Crystallographica Section C Structural Chemistry","volume":" ","pages":"455-461"},"PeriodicalIF":0.9000,"publicationDate":"2025-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12322929/pdf/","citationCount":"0","resultStr":"{\"title\":\"Good data with `bad' reflections: the employment of non-spherical scattering factors in the redetermination of the structure of O-ethyl N-phenylcarbamate.\",\"authors\":\"Peter G Jones\",\"doi\":\"10.1107/S2053229625005959\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>The structure of O-ethyl N-phenylthiocarbamate, C<sub>9</sub>H<sub>11</sub>NOS (2), has been redetermined, confirming the results obtained in three earlier structure determinations. The higher data quality provided by modern diffractomers has enabled a reliable analysis (absent from the earlier reports) of the hydrogen bonding. However, conventional refinement of the structure of 2 was unsatisfactory because of the large number of extremely badly-fitting reflections, leading to many checkCIF `ALERT A' messages that might be detrimental to ease of publication. A refinement using nonspherical scattering factors effectively eliminated this problem. There are three independent molecules of 2 in the asymmetric unit; two are directly connected by two N-H...S hydrogen bonds, forming a dimer with the well-known R<sub>2</sub><sup>2</sup>(8) motif. The other molecule forms a topologically identical but inversion-symmetric dimer. Each type of dimer occupies a different region parallel to the ac plane (molecule 1, y ≃ 0; molecules 2 and 3, y ≃ 1/3 and 2/3). All three molecules lie in planes parallel to (031). The title compound is effectively isotypic to 1-ethyl-3-phenylthiourea (another known structure for which the hydrogen bonding was not analysed) because its EtNH group, like the EtO group of 2, is not involved in hydrogen bonding.</p>\",\"PeriodicalId\":7115,\"journal\":{\"name\":\"Acta Crystallographica Section C Structural Chemistry\",\"volume\":\" \",\"pages\":\"455-461\"},\"PeriodicalIF\":0.9000,\"publicationDate\":\"2025-08-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12322929/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Acta Crystallographica Section C Structural Chemistry\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://doi.org/10.1107/S2053229625005959\",\"RegionNum\":4,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2025/7/10 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"Q4\",\"JCRName\":\"CHEMISTRY, MULTIDISCIPLINARY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Acta Crystallographica Section C Structural Chemistry","FirstCategoryId":"92","ListUrlMain":"https://doi.org/10.1107/S2053229625005959","RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/7/10 0:00:00","PubModel":"Epub","JCR":"Q4","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
Good data with `bad' reflections: the employment of non-spherical scattering factors in the redetermination of the structure of O-ethyl N-phenylcarbamate.
The structure of O-ethyl N-phenylthiocarbamate, C9H11NOS (2), has been redetermined, confirming the results obtained in three earlier structure determinations. The higher data quality provided by modern diffractomers has enabled a reliable analysis (absent from the earlier reports) of the hydrogen bonding. However, conventional refinement of the structure of 2 was unsatisfactory because of the large number of extremely badly-fitting reflections, leading to many checkCIF `ALERT A' messages that might be detrimental to ease of publication. A refinement using nonspherical scattering factors effectively eliminated this problem. There are three independent molecules of 2 in the asymmetric unit; two are directly connected by two N-H...S hydrogen bonds, forming a dimer with the well-known R22(8) motif. The other molecule forms a topologically identical but inversion-symmetric dimer. Each type of dimer occupies a different region parallel to the ac plane (molecule 1, y ≃ 0; molecules 2 and 3, y ≃ 1/3 and 2/3). All three molecules lie in planes parallel to (031). The title compound is effectively isotypic to 1-ethyl-3-phenylthiourea (another known structure for which the hydrogen bonding was not analysed) because its EtNH group, like the EtO group of 2, is not involved in hydrogen bonding.
期刊介绍:
Acta Crystallographica Section C: Structural Chemistry is continuing its transition to a journal that publishes exciting science with structural content, in particular, important results relating to the chemical sciences. Section C is the journal of choice for the rapid publication of articles that highlight interesting research facilitated by the determination, calculation or analysis of structures of any type, other than macromolecular structures. Articles that emphasize the science and the outcomes that were enabled by the study are particularly welcomed. Authors are encouraged to include mainstream science in their papers, thereby producing manuscripts that are substantial scientific well-rounded contributions that appeal to a broad community of readers and increase the profile of the authors.