急性髓系白血病中维托克拉克斯敏感性和耐药机制的生物信息学分析。

Q3 Medicine
Y Yang, C H Xu, N Wang, J T Fan, D D Yang, M M Niu, L Shen, H Wang
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引用次数: 0

摘要

目的:探讨venetoclax对急性髓性白血病(AML)的抗白血病作用及耐药机制。从Beat AML数据库中下载了接受venetoclax药物敏感性测试的AML患者的基因组、转录组学和临床数据。将这些数据与venetoclax敏感性结果进行相关性分析。从转录组学数据中鉴定出与venetoclax敏感性相关的差异表达基因(DEGs),随后使用GEO数据库转录组学结果和体外实验(包括Western blot)进行验证。通过功能富集分析(KEGG和GSEA)、转录因子富集分析(KnockTF)和公共数据库数据进一步研究影响药物敏感性的关键基因和途径。结果:在筛选Beat AML队列后,纳入了52例具有体外venetoclax敏感性结果的患者样本数据进行分析。与FLT3野生型相比,FLT3突变患者对venetoclax的敏感性更高。临床资料与药敏数据的相关性分析表明,外周血肿瘤负荷越高,对venetoclax的敏感性越高。转录组学分析和体外实验证实,venetoclax抑制FLT3相关信号通路,包括下调FLT3表达,降低其下游靶点AKT和STAT5的磷酸化。KEGG通路和KnockTF转录因子富集分析表明,venetoclax抗性与FOXM1和STAT3转录活性增加有关。此外,FOXM1和STAT3的高表达与患者的总生存期缩短相关。结论:Venetoclax可抑制flt3相关信号通路的激活。STAT3和FOXM1转录因子的激活是AML中venetoclax耐药的潜在关键机制。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
[Bioinformatic analysis of venetoclax sensitivity and resistance mechanisms in acute myeloid leukemia].

Objective: To investigate the anti-leukemic effects and resistance mechanisms of venetoclax in acute myeloid leukemia (AML). Genomic, transcriptomic, and clinical data from AML patients who underwent venetoclax drug sensitivity testing were downloaded from the Beat AML database. Correlation analysis was performed between these data and venetoclax sensitivity outcomes. Differentially expressed genes (DEGs) associated with venetoclax sensitivity were identified from transcriptomic data and subsequently validated using GEO database transcriptomic results and in vitro experiments (including Western blot). Functional enrichment analyses (KEGG and GSEA), transcription factor enrichment analysis (KnockTF), and data from public databases were employed to further investigate key genes and pathways influencing drug sensitivity. Results: After filtering the Beat AML cohort, data from 52 patient samples with available in vitro venetoclax sensitivity results were included for analysis. Patients with FLT3 mutations exhibited greater sensitivity to venetoclax compared to those with FLT3 wild-type. Correlation analysis between clinical information and drug sensitivity data indicated that higher peripheral blood tumor burden was associated with increased sensitivity to venetoclax. Transcriptomic analysis and in vitro experiments confirmed that venetoclax inhibits the FLT3-related signaling pathway, including downregulation of FLT3 expression and reduced phosphorylation of its downstream targets AKT and STAT5. KEGG pathway and KnockTF transcription factor enrichment analyses indicated that venetoclax resistance was associated with increased transcriptional activity of FOXM1 and STAT3. Moreover, high expression of FOXM1 and STAT3 correlated with shorter overall survival in patients. Conclusion: Venetoclax can inhibit the activation of FLT3-related signaling pathways. The activation of STAT3 and FOXM1 transcription factors is a potential key mechanism contributing to venetoclax resistance in AML.

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CiteScore
0.80
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发文量
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