Evgeniia M Maksiutenko, Igor V Bezdvornykh, Yury A Barbitoff, Yulia A Nasykhova, Andrey S Glotov
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PLoV: a comprehensive database of genetic variants leading to pregnancy loss.
Pregnancy loss is an important reproductive health problem that affects many couples. Genetic factors play an important role in both spontaneous miscarriage and recurrent pregnancy loss, and the effect of genomic variants is recognized as one of the major causes of pregnancy loss in euploid foetuses. In this work, we extend our previous analysis of the genetic landscape of pregnancy loss and develop a Pregnancy Loss genetic Variant (PLoV) database to aggregate information about mutations that have been implicated in pregnancy loss. The database contains information about 534 genetic variants that have been observed in 421 cases across 47 studies, including foetus-only, parent-only, and trio-based studies. For each case, the database includes a detailed description of the phenotype, including ultrasound data (if provided in the original article). The genetic variants are scattered across all chromosomes in the human genome and affect a total of 292 unique genes. We provide a public access to the PLoV database at https://plovdb.ott.ru/. Database URL: https://plovdb.ott.ru/.
期刊介绍：
Huge volumes of primary data are archived in numerous open-access databases, and with new generation technologies becoming more common in laboratories, large datasets will become even more prevalent. The archiving, curation, analysis and interpretation of all of these data are a challenge. Database development and biocuration are at the forefront of the endeavor to make sense of this mounting deluge of data.
Database: The Journal of Biological Databases and Curation provides an open access platform for the presentation of novel ideas in database research and biocuration, and aims to help strengthen the bridge between database developers, curators, and users.
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