铕探针结合血清白蛋白和α-1-AGP,构型、电荷和大小互补至关重要

IF 7.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY
Huishan Li, Lok Wan Ng, Dominic J. Black, Wei Han, Robert Pal, David Parker
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引用次数: 0

摘要

结合发光研究和随机分子动力学模拟首次揭示了与谷氨酸蛋白残基的疏水结合和可逆金属离子配位是如何发生的。该方法已被用于解释在三种结构类似的手性铕(III)配合物和血清白蛋白的常见变体之间观察到的非常不同的结合自由能。特别地,观察到羧酸盐与谷氨酸残基的可逆结合;这种残留物存在于人血清白蛋白中,而不存在于其他变体中。结合自由能对铕探针的结构和电荷非常敏感,有利于手性结合口袋中右手立体异构体的络合。每个过程都通过短片可视化,揭示探针构象交换动力学和通往蛋白质结合位点的途径,在亚微秒的时间尺度上。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Europium probe binding to serum albumin and α-1-AGP, key importance of configuration, charge and size complementarity
Combined luminescence studies and stochastic molecular dynamics simulations have revealed for the first time how cooperative hydrophobic binding and reversible metal ion coordination to protein glutamate residues occurs. The approach has been used to explain the very different free energies of binding observed between three structurally analogous chiral europium (III) complexes and the common variants of serum albumin. In particular, reversible binding of a carboxylate from a glutamate residue was observed; this residue is found in human serum albumin but not the other variants. The binding free energy is exquisitely sensitive to the europium probe structure and charge, and favours complexation of a right handed stereoisomer in the chiral binding pocket. Each process has been visualised by short movies, revealing probe conformational exchange dynamics and the pathway to the protein binding site, on a sub-microsecond timescale.
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来源期刊
Chemical Science
Chemical Science CHEMISTRY, MULTIDISCIPLINARY-
CiteScore
14.40
自引率
4.80%
发文量
1352
审稿时长
2.1 months
期刊介绍: Chemical Science is a journal that encompasses various disciplines within the chemical sciences. Its scope includes publishing ground-breaking research with significant implications for its respective field, as well as appealing to a wider audience in related areas. To be considered for publication, articles must showcase innovative and original advances in their field of study and be presented in a manner that is understandable to scientists from diverse backgrounds. However, the journal generally does not publish highly specialized research.
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