角化细胞癌表型危险因素的因果评估。

IF 6.2 Q2 GENETICS & HEREDITY
Phenomics (Cham, Switzerland) Pub Date : 2025-04-09 eCollection Date: 2025-04-01 DOI:10.1007/s43657-024-00174-w
Yantao Xu, Zixi Jiang, Ying Wang, Jiachen Liu, Shuang Zhao
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引用次数: 0

摘要

先前的观察性和全基因组关联研究(GWAS)表明,几种表型因素与角化细胞癌之间存在关联,包括生活方式和饮食、光损伤相关条件和社会经济地位。这些表型因子在角化细胞癌病因学中的因果作用尚不清楚。在这项研究中,我们对超过30万例角质形成细胞癌患者的多个大规模GWAS数据集进行了双样本孟德尔随机化分析。通过鉴定与相关因子相关的单核苷酸多态性(snp),构建遗传工具变量(IVs)。采用逆方差加权(IVW)方法和加权中位数估计、MR- egger回归、简单模型和加权模型四种鲁棒MR方法进行因果推断和评估结果间的敏感性。在本分析中,皮肤容易晒黑被确定为角化细胞癌(基底细胞癌:IVW OR = 0.718, 95% CI 0.654-0.788, pp)的偶然保护因素。补充信息:在线版本包含补充资料,可在10.1007/s43657-024-00174-w。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Causal Assessment of Phenotypic Risk Factors with Keratinocyte Carcinoma.

Previous observational and genomic-wide association studies (GWAS) suggested the association between several phenotypic factors and keratinocyte carcinoma, including lifestyle and dietary, photodamage-related conditions and socioeconomic status. The causal effect of these phenotypic factors in keratinocytes carcinoma etiology remains unclear. In this study, we utilized two-sample mendelian randomization analysis from multiple large-scale GWAS datasets of keratinocytes carcinoma including more than 300,000 patients. Genetic instrumental variables (IVs) were constructed by identifying single nucleotide polymorphisms (SNPs) that associate with corresponding factors. The inverse variance weighted (IVW) method and four robust MR approaches, including weighted median estimator, MR-Egger regression, simple mode and weighted mode were implemented for causal inferences and assess the sensitivity across findings. In this analysis, ease of skin tanning was identified as casual protective factor of keratinocyte carcinoma (Basal cell carcinoma: IVW OR = 0.718, 95% CI 0.654-0.788, p < 0.001; Cutaneous squamous cell carcinoma: IVW OR = 0.601, 95% CI 0.516-0.701, p < 0.001). Other phenotypic factors, such as coffee intake, alcohol consumption, smoking and socioeconomic status, indicated insignificant effects on keratinocyte carcinoma risk in the analysis, and therefore, our study does not support their roles in modifying keratinocytes carcinoma risks. Our extensive analysis provides strong evidence of the causative protective effect of ease of skin tanning in keratinocyte carcinoma. The findings suggest that individuals who are less prone to tanning may need to pay greater attention to sun protection in their daily activities to reduce the potential risk of keratinocyte cancers.

Supplementary information: The online version contains supplementary material available at 10.1007/s43657-024-00174-w.

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