由OIP5-AS1调控的RNA结合蛋白hurr可能参与了人类母体向合子转变过程中母体转录物的降解。

IF 3.5 2区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
Yan-Na Liu, Ke-Yi Li, Hao Wei, Wen-Xiu Li, Yue-Hua Zhang, Jia-Jun Qiu, Fanyi Zeng, Jing-Bin Yan
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引用次数: 0

摘要

背景:母体-合子转化(MZT)是人类早期发育的一个关键过程,涉及母体基因转录物的降解和合子基因的激活。母体转录本降解中的任何破坏都可能与某些生殖障碍有关。然而,母体基因转录物在这一转变过程中降解的确切机制尚不清楚。结果:通过加权基因共表达网络分析,鉴定出一个卵母细胞特异性模块,该模块与8细胞期母体转录物降解的表达模式高度一致,与细胞周期和转录因子结合有关。在该模块中,鉴定出母体长链非编码RNA OIP5反义RNA 1 (OIP5- as1)。研究发现,OIP5-AS1可以与RNA结合蛋白人抗原R (human antigen R, HuR)结合,这可能会限制其与其他mrna的结合,并有助于MZT期间母体转录物的降解。此外,人类诱导多能干细胞(iPSCs)的RNA免疫沉淀测序显示,HuR和OIP5-AS1可能紧密结合在一起,参与细胞周期和转录调控的相关功能。当敲低OIP5-AS1和编码人类iPSCs中HuR蛋白的ELAVL1基因时,观察到母体转录本的表达水平显著降低,这表明这些因素在早期发育过程中调节母体转录本的稳定性方面发挥了重要作用。结论:HuR蛋白在早期人类胚胎发育MZT过程中对母体转录本的降解起关键作用。了解OIP5-AS1在调节HuR蛋白中的作用可以为发育生物学提供有价值的见解,并可能为发育障碍提供新的治疗策略。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
RNA binding protein HuR regulated by OIP5-AS1 may be involved in maternal transcript degradation during the human maternal-to-zygotic transition.

Background: The maternal-to-zygotic transition (MZT) is a critical process in early human development, involving the degradation of maternal gene transcripts and activation of zygotic genes. Any disruption in the degradation of maternal transcripts may be associated with some reproductive disorders. However, the precise mechanism by which maternal gene transcripts are degraded during this transition remains unclear.

Results: Through an analysis of weighted gene co-expression networks, an oocyte-specific module was identified, showing high consistency with the expression pattern of maternal transcripts degraded at the 8-cell stage, which is associated with the cell cycle and transcription factor binding. Within this module, a maternal long non-coding RNA known as OIP5 antisense RNA 1 (OIP5-AS1) was identified. It was observed that OIP5-AS1 can bind to the RNA binding protein human antigen R (HuR), potentially limiting its availability for other mRNAs and contributing to the degradation of maternal transcripts during MZT. Moreover, RNA immunoprecipitation sequencing in human induced pluripotent stem cells (iPSCs) revealed HuR and OIP5-AS1 are likely to tightly bind together and involved in functions related to the cell cycle and transcriptional regulation. Upon knocking down OIP5-AS1 and the ELAVL1 gene, which encodes the HuR protein in human iPSCs, a significant reduction in the expression levels of maternal transcripts was observed, suggesting an essential role of these factors in regulating maternal transcript stability during early development.

Conclusions: The HuR protein plays a critical role in influencing the degradation of maternal transcripts during the MZT in early human embryonic development. Understanding the role of OIP5-AS1 in regulating HuR protein could provide valuable insights into developmental biology and potentially lead to new therapeutic strategies for developmental disorders.

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来源期刊
BMC Genomics
BMC Genomics 生物-生物工程与应用微生物
CiteScore
7.40
自引率
4.50%
发文量
769
审稿时长
6.4 months
期刊介绍: BMC Genomics is an open access, peer-reviewed journal that considers articles on all aspects of genome-scale analysis, functional genomics, and proteomics. BMC Genomics is part of the BMC series which publishes subject-specific journals focused on the needs of individual research communities across all areas of biology and medicine. We offer an efficient, fair and friendly peer review service, and are committed to publishing all sound science, provided that there is some advance in knowledge presented by the work.
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