锌(II),镉(II)和汞(II)黄药配合物的QTAIM拓扑分析。

IF 2.5 4区 化学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY
Daniella B. de Miranda, Henrique C. Silva Junior, Glaucio B. Ferreira
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引用次数: 0

摘要

背景:由于人口增长和工业活动,重金属对环境的污染正在增加,这对环境产生了重大影响。黄原酸盐与金属形成稳定的配合物,用于将金属从水环境中去除。这些化合物以其在矿石浮选中的作用而闻名,在生物领域和薄膜生产中也有应用。由于黄药与金属中心配位的通用性,了解这些系统中金属配位键的性质是至关重要的。鉴于它们的配位多功能性,了解金属与配体的相互作用是必不可少的。因此,本研究探讨了含n-丙基黄药和水的化合物与Zn2+、Cd2+和Hg2+离子的金属配体键的性质。QTAIM分析表明,金属- oh - 2键主要为静电键,而金属- s键部分为共价键,且共价沿12基团(Zn2 + 2 + 2 +)呈增加趋势,特别是在中性和双齿配合物中,证实了Pearson的理论。方法:采用QTAIM分析了前期研究的含12族金属的正丙基黄药配合物的30个结构。这些化合物已经通过能量分解分析进行了分析,为与本文提出的QTAIM结果进行比较提供了基础。QTAIM使用在DFT级别(M06L/def2-TZVP)生成的wfx文件执行,并使用Multiwfn进行分析。波函数(wfx)文件包含精确拓扑分析所必需的电子密度分布的详细信息,并使用Multiwfn生成和分析以表征金属-配体相互作用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

QTAIM topological analyses of zinc(II), cadmium(II), and mercury(II) xanthate complexes

QTAIM topological analyses of zinc(II), cadmium(II), and mercury(II) xanthate complexes

Context

Environmental contamination by heavy metals is increasing due to population growth and industrial activity, which is having a major impact on the environment. Xanthates, which form stable complexes with metals, are used to remove them from aqueous environments. Known for their role in ore flotation, these compounds also have applications in the biological field and thin film production. Due to the versatility of the coordination of xanthates to metal centers, it is essential to understand the nature of the metal–ligand bonds in these systems. Given their coordination versatility, understanding metal–ligand interactions is essential. Therefore, this study investigates the nature of the metal–ligand bonds of compounds containing n-propyl xanthate and water, with Zn2+, Cd2+, and Hg2+ ions. QTAIM analysis revealed that the metal-OH₂ bonds are predominantly electrostatic, while the metal-S bonds are partially covalent, with an increasing trend of covalency along group 12 (Zn2⁺ < Cd2⁺ < Hg2⁺), especially in the neutral and bidentate complexes, corroborating Pearson’s theory.

Methods

QTAIM analysis was carried out on 30 structures of n-propyl xanthate complexes with group 12 metals, which were previously investigated in earlier studies. These compounds had already been analyzed through energy decomposition analysis, providing a basis for comparison with the QTAIM results presented in this work. QTAIM was performed using wfx files generated at the DFT level (M06L/def2-TZVP) and analyzed with Multiwfn. Wavefunction (wfx) files, which contain detailed information on the electronic density distribution essential for accurate topological analysis, were generated and analyzed using Multiwfn to characterize the metal–ligand interactions.

Graphical abstract

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来源期刊
Journal of Molecular Modeling
Journal of Molecular Modeling 化学-化学综合
CiteScore
3.50
自引率
4.50%
发文量
362
审稿时长
2.9 months
期刊介绍: The Journal of Molecular Modeling focuses on "hardcore" modeling, publishing high-quality research and reports. Founded in 1995 as a purely electronic journal, it has adapted its format to include a full-color print edition, and adjusted its aims and scope fit the fast-changing field of molecular modeling, with a particular focus on three-dimensional modeling. Today, the journal covers all aspects of molecular modeling including life science modeling; materials modeling; new methods; and computational chemistry. Topics include computer-aided molecular design; rational drug design, de novo ligand design, receptor modeling and docking; cheminformatics, data analysis, visualization and mining; computational medicinal chemistry; homology modeling; simulation of peptides, DNA and other biopolymers; quantitative structure-activity relationships (QSAR) and ADME-modeling; modeling of biological reaction mechanisms; and combined experimental and computational studies in which calculations play a major role.
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