{"title":"Amla β - Glucogallin提取机理研究:DFT、对接和分子动力学模拟","authors":"Anaswara Uppumthara, Rohith Ramasamy, Alen Binu Abraham, Deepa kallumpurath, Rajadurai Vijay Solomon","doi":"10.1002/adts.202500422","DOIUrl":null,"url":null,"abstract":"Reactive oxygen species (ROS) have garnered significant interest due to their role in cellular signaling and potential to induce cell death. The search for effective antioxidants from natural sources continues, with recent focus on β‐glucogallin (BGG) from <jats:italic>Emblica officinalis</jats:italic> (amla). Despite BGG's seven OH groups, the specific group responsible for its antioxidant properties remains unclear. Comprehensive density functional theory (DFT) calculations are conducted, revealing the predominant involvement of the hydrogen atom transfer (HAT) mechanism. Specifically, the sixth OH group exhibits high HOO<jats:sup>•</jats:sup> radical scavenging activity, supported by its low bond dissociation value of 87.92 kcal mol<jats:sup>−1</jats:sup>. Molecular docking and dynamics simulations with monoamine oxidase (MAO) and xanthine oxidase (XO) shed light on BGG's binding modes and stability within proteins. These findings provide crucial insights into BGG's antioxidant action, aiding the development of antioxidant therapies in medicinal chemistry.","PeriodicalId":7219,"journal":{"name":"Advanced Theory and Simulations","volume":"41 1","pages":""},"PeriodicalIF":2.9000,"publicationDate":"2025-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Mechanistic Study of β‐Glucogallin Extracted from Amla: DFT, Docking, and Molecular Dynamics Simulations\",\"authors\":\"Anaswara Uppumthara, Rohith Ramasamy, Alen Binu Abraham, Deepa kallumpurath, Rajadurai Vijay Solomon\",\"doi\":\"10.1002/adts.202500422\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Reactive oxygen species (ROS) have garnered significant interest due to their role in cellular signaling and potential to induce cell death. The search for effective antioxidants from natural sources continues, with recent focus on β‐glucogallin (BGG) from <jats:italic>Emblica officinalis</jats:italic> (amla). Despite BGG's seven OH groups, the specific group responsible for its antioxidant properties remains unclear. Comprehensive density functional theory (DFT) calculations are conducted, revealing the predominant involvement of the hydrogen atom transfer (HAT) mechanism. Specifically, the sixth OH group exhibits high HOO<jats:sup>•</jats:sup> radical scavenging activity, supported by its low bond dissociation value of 87.92 kcal mol<jats:sup>−1</jats:sup>. Molecular docking and dynamics simulations with monoamine oxidase (MAO) and xanthine oxidase (XO) shed light on BGG's binding modes and stability within proteins. These findings provide crucial insights into BGG's antioxidant action, aiding the development of antioxidant therapies in medicinal chemistry.\",\"PeriodicalId\":7219,\"journal\":{\"name\":\"Advanced Theory and Simulations\",\"volume\":\"41 1\",\"pages\":\"\"},\"PeriodicalIF\":2.9000,\"publicationDate\":\"2025-07-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Advanced Theory and Simulations\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://doi.org/10.1002/adts.202500422\",\"RegionNum\":4,\"RegionCategory\":\"工程技术\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"MULTIDISCIPLINARY SCIENCES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Advanced Theory and Simulations","FirstCategoryId":"5","ListUrlMain":"https://doi.org/10.1002/adts.202500422","RegionNum":4,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"MULTIDISCIPLINARY SCIENCES","Score":null,"Total":0}
Mechanistic Study of β‐Glucogallin Extracted from Amla: DFT, Docking, and Molecular Dynamics Simulations
Reactive oxygen species (ROS) have garnered significant interest due to their role in cellular signaling and potential to induce cell death. The search for effective antioxidants from natural sources continues, with recent focus on β‐glucogallin (BGG) from Emblica officinalis (amla). Despite BGG's seven OH groups, the specific group responsible for its antioxidant properties remains unclear. Comprehensive density functional theory (DFT) calculations are conducted, revealing the predominant involvement of the hydrogen atom transfer (HAT) mechanism. Specifically, the sixth OH group exhibits high HOO• radical scavenging activity, supported by its low bond dissociation value of 87.92 kcal mol−1. Molecular docking and dynamics simulations with monoamine oxidase (MAO) and xanthine oxidase (XO) shed light on BGG's binding modes and stability within proteins. These findings provide crucial insights into BGG's antioxidant action, aiding the development of antioxidant therapies in medicinal chemistry.
期刊介绍:
Advanced Theory and Simulations is an interdisciplinary, international, English-language journal that publishes high-quality scientific results focusing on the development and application of theoretical methods, modeling and simulation approaches in all natural science and medicine areas, including:
materials, chemistry, condensed matter physics
engineering, energy
life science, biology, medicine
atmospheric/environmental science, climate science
planetary science, astronomy, cosmology
method development, numerical methods, statistics