向其氨基端引入精氨酸残基增强刺叶虫素的抗菌活性:阳离子-π相互作用的可能作用。

IF 3.8 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY
ACS Bio & Med Chem Au Pub Date : 2025-03-20 eCollection Date: 2025-06-18 DOI:10.1021/acsbiomedchemau.4c00119
Jyotshana Saroj, Rahul Dev Verma, Sariyah Akhtar, Neeraj Kumar Verma, Arvind Gupta, Arsh Tripathi, Juhi Sharma, Kalyan Mitra, Mohammad Imran Siddiqi, Jimut Kanti Ghosh
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引用次数: 0

摘要

Spiniferin是一种13-mer的蝎源抗菌肽,抗菌活性较差。为了增强Spiniferin的抗菌活性,我们通过在其氨基端用精氨酸残基取代谷氨酸残基来增强其净正电荷。我们设想在这个精氨酸残基和位于Spiniferin中间的色氨酸残基之间可以引入阳离子-π相互作用。这种阳离子-π相互作用可以促进肽与带负电荷的细菌膜更强的相互作用,从而提高其抗菌活性。虽然谷氨酸-精氨酸替代[Spiniferin-(E4R)]增强了Spiniferin的抗菌和毒性,但与d-精氨酸残基相同的替代[Spiniferin-(E4dR)]显著增强了其对选定的革兰氏阴性/阳性细菌和MRSA菌株的抗菌活性,同时保持低溶血/细胞毒性。有趣的是,Spiniferin-(E4dR)类似物,其芳香色氨酸残基被芳香苯丙氨酸或脂肪族缬氨酸残基取代,其d精氨酸残基被d赖氨酸残基取代,其抗菌活性远低于Spiniferin-(E4dR)或Spiniferin-(E4R)。结果表明,色氨酸和l-/d-精氨酸组合在增强Spiniferin类似物,Spiniferin-(E4R)和Spiniferin-(E4dR)的抗菌活性中起着至关重要的作用。Spiniferin-(E4dR)对选定的革兰氏阳性/阴性菌均有杀菌作用。它能渗透细菌膜并诱导细菌膜组织损伤,表明细菌质膜是其表现出抗菌活性的靶标。此外,静脉注射Spiniferin-(E4dR)证实了大肠杆菌ATCC 25922感染小鼠的存活和这些小鼠内脏器官的细菌清除。计算研究表明,在Spiniferin-(E4dR)/Spiniferin-(E4R)中,精氨酸的阳离子侧链与色氨酸残基的π电子位点之间的距离是分子内阳离子-π相互作用的必要条件。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Augmentation of Antimicrobial Activity of Spiniferin by Introducing an Arginine Residue Toward Its Amino Terminus: A Possible Role of Cation-π Interaction.

Spiniferin is a 13-mer scorpion-origin antimicrobial peptide having poor antimicrobial activity. To augment Spiniferin's antimicrobial activity, we enhanced its net positive charge by replacing a glutamic acid residue with an arginine residue toward its amino terminus. We envisaged that a cation-π interaction could be introduced between this arginine residue and the tryptophan residue located near the middle of Spiniferin. This cation-π interaction could promote stronger interaction of the peptide with a negatively charged bacterial membranes, resulting in its increased antimicrobial activity. Though glutamic acid-to-arginine substitution [Spiniferin-(E4R)] enhanced both the antimicrobial and toxic properties of Spiniferin, the same replacement with a d-arginine residue [Spiniferin-(E4dR)] significantly enhanced its antimicrobial activity against selected Gram-negative/positive bacteria and a MRSA strain while maintaining low hemolytic/cytotoxic properties. Interestingly, Spiniferin-(E4dR) analogs, with its aromatic-tryptophan residue substituted with an aromatic phenylalanine or an aliphatic valine residue, and its d-arginine residue replaced with a d-lysine residue, showed much lesser antibacterial activity than Spiniferin-(E4dR) or Spiniferin-(E4R). The results indicated a crucial role of the tryptophan and l-/d-arginine combination in augmenting the antimicrobial activity of Spiniferin analogs, Spiniferin-(E4R) and Spiniferin-(E4dR). Spiniferin-(E4dR) showed bactericidal properties against selected Gram-positive/negative bacteria. It permeabilized bacterial membranes and induced damages in bacterial membrane organization, suggesting that the bacterial plasma membrane is its target for exhibiting antimicrobial activity. Further, Spiniferin-(E4dR) in the intravenous route demonstrated the survival of E. coli ATCC 25922-infected mice and the clearance of bacteria from the visceral organs of these mice. Computational studies showed the requisite distance between the arginine's cationic side chain and the π-electron site of the tryptophan residue for a possible intramolecular cation-π interaction in Spiniferin-(E4dR)/Spiniferin-(E4R).

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来源期刊
ACS Bio & Med Chem Au
ACS Bio & Med Chem Au 药物、生物、化学-
CiteScore
4.10
自引率
0.00%
发文量
0
期刊介绍: ACS Bio & Med Chem Au is a broad scope open access journal which publishes short letters comprehensive articles reviews and perspectives in all aspects of biological and medicinal chemistry. Studies providing fundamental insights or describing novel syntheses as well as clinical or other applications-based work are welcomed.This broad scope includes experimental and theoretical studies on the chemical physical mechanistic and/or structural basis of biological or cell function in all domains of life. It encompasses the fields of chemical biology synthetic biology disease biology cell biology agriculture and food natural products research nucleic acid biology neuroscience structural biology and biophysics.The journal publishes studies that pertain to a broad range of medicinal chemistry including compound design and optimization biological evaluation molecular mechanistic understanding of drug delivery and drug delivery systems imaging agents and pharmacology and translational science of both small and large bioactive molecules. Novel computational cheminformatics and structural studies for the identification (or structure-activity relationship analysis) of bioactive molecules ligands and their targets are also welcome. The journal will consider computational studies applying established computational methods but only in combination with novel and original experimental data (e.g. in cases where new compounds have been designed and tested).Also included in the scope of the journal are articles relating to infectious diseases research on pathogens host-pathogen interactions therapeutics diagnostics vaccines drug-delivery systems and other biomedical technology development pertaining to infectious diseases.
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