一个基于matlab的仪器控制(MIC)包荧光成像。

Journal of open source software Pub Date : 2025-01-01 Epub Date: 2025-01-28 DOI:10.21105/joss.07275
Sajjad A Khan, Sandeep Pallikkuth, David J Schodt, Marjolein B M Meddens, Hanieh Mazloom-Farsibaf, Michael J Wester, Sheng Liu, Ellyse Taylor, Mohamadreza Fazel, Farzin Farzam, Keith A Lidke
{"title":"一个基于matlab的仪器控制(MIC)包荧光成像。","authors":"Sajjad A Khan, Sandeep Pallikkuth, David J Schodt, Marjolein B M Meddens, Hanieh Mazloom-Farsibaf, Michael J Wester, Sheng Liu, Ellyse Taylor, Mohamadreza Fazel, Farzin Farzam, Keith A Lidke","doi":"10.21105/joss.07275","DOIUrl":null,"url":null,"abstract":"<p><p>MATLAB Instrument Control (MIC) is a software package designed to facilitate data collection for custom-built microscopes. Utilizing object-oriented programming, MIC provides a class for each low-level instrument. These classes inherit from a common MIC abstract class, ensuring a uniform interface across different instruments. Key components such as lasers, stages, power meter and cameras are grouped under abstract subclasses, which standardize interfaces and simplify the development of control classes for new instruments. Both simple and complex systems can be built from these lower level tools. Since the interoperation is developed by the end user, the modes or sequence of operations can be flexibly designed with interactive or automated data collection and integrated analysis. MATLAB provides the ability to create GUIs and therefore MIC allows for both rapid prototyping and for building custom, high-level user interfaces that can be used for production instruments.</p>","PeriodicalId":94101,"journal":{"name":"Journal of open source software","volume":"10 105","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12176407/pdf/","citationCount":"0","resultStr":"{\"title\":\"A MATLAB-based Instrument Control (MIC) package for fluorescence imaging.\",\"authors\":\"Sajjad A Khan, Sandeep Pallikkuth, David J Schodt, Marjolein B M Meddens, Hanieh Mazloom-Farsibaf, Michael J Wester, Sheng Liu, Ellyse Taylor, Mohamadreza Fazel, Farzin Farzam, Keith A Lidke\",\"doi\":\"10.21105/joss.07275\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>MATLAB Instrument Control (MIC) is a software package designed to facilitate data collection for custom-built microscopes. Utilizing object-oriented programming, MIC provides a class for each low-level instrument. These classes inherit from a common MIC abstract class, ensuring a uniform interface across different instruments. Key components such as lasers, stages, power meter and cameras are grouped under abstract subclasses, which standardize interfaces and simplify the development of control classes for new instruments. Both simple and complex systems can be built from these lower level tools. Since the interoperation is developed by the end user, the modes or sequence of operations can be flexibly designed with interactive or automated data collection and integrated analysis. MATLAB provides the ability to create GUIs and therefore MIC allows for both rapid prototyping and for building custom, high-level user interfaces that can be used for production instruments.</p>\",\"PeriodicalId\":94101,\"journal\":{\"name\":\"Journal of open source software\",\"volume\":\"10 105\",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2025-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12176407/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of open source software\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.21105/joss.07275\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2025/1/28 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of open source software","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.21105/joss.07275","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/1/28 0:00:00","PubModel":"Epub","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

摘要

MATLAB仪器控制(MIC)是一个软件包,旨在方便定制显微镜的数据收集。MIC利用面向对象编程,为每个低级仪器提供一个类。这些类继承自一个通用的MIC抽象类,确保了跨不同乐器的统一接口。将激光器、舞台、功率计和摄像机等关键部件分组到抽象子类中,使接口标准化,简化了新仪器控制类的开发。简单和复杂的系统都可以用这些低级工具构建。由于互操作是由最终用户开发的,因此可以灵活地设计操作模式或顺序,进行交互式或自动化的数据收集和集成分析。MATLAB提供了创建gui的能力,因此MIC允许快速原型和构建可用于生产仪器的自定义高级用户界面。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
A MATLAB-based Instrument Control (MIC) package for fluorescence imaging.

MATLAB Instrument Control (MIC) is a software package designed to facilitate data collection for custom-built microscopes. Utilizing object-oriented programming, MIC provides a class for each low-level instrument. These classes inherit from a common MIC abstract class, ensuring a uniform interface across different instruments. Key components such as lasers, stages, power meter and cameras are grouped under abstract subclasses, which standardize interfaces and simplify the development of control classes for new instruments. Both simple and complex systems can be built from these lower level tools. Since the interoperation is developed by the end user, the modes or sequence of operations can be flexibly designed with interactive or automated data collection and integrated analysis. MATLAB provides the ability to create GUIs and therefore MIC allows for both rapid prototyping and for building custom, high-level user interfaces that can be used for production instruments.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
审稿时长
3 weeks
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信