一种新的衰老转录组测量的发展:转录组死亡风险年龄(TraMA)。

IF 3.9 3区 医学 Q2 CELL BIOLOGY
Aging-Us Pub Date : 2025-06-13 DOI:10.18632/aging.206272
Eric T Klopack, Gokul Seshadri, Thalida Em Arpawong, Steve Cole, Bharat Thyagarajan, Eileen M Crimmins
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引用次数: 0

摘要

越来越多的研究表明,衰老是发生在多个生物水平上的协调的多系统功能下降。我们开发并验证了一种基于转录组(rna)的衰老测量方法,我们称之为转录组死亡风险年龄(TraMA),使用2016年健康与退休研究的RNA-seq数据,使用弹性网Cox回归分析来预测4年死亡率风险。在抵抗测试样本中,TraMA与更早的死亡率、更多的慢性疾病、更差的认知功能和更多的日常生活活动限制有关。TraMA也在长寿命家庭研究和几个公开可用的数据集中进行了外部验证。结果表明,TraMA是一种可靠的、便携的、基于rnaseq的衰老测量方法,可与过去的生物衰老测量方法(如GrimAge)相比较,但独立于后者。对于有兴趣了解健康和老龄化背后的生物学过程,以及健康和老龄化的社会、心理、流行病学和人口统计学研究的研究人员来说,TraMA可能具有特别的价值。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Development of a novel transcriptomic measure of aging: Transcriptomic Mortality-risk Age (TraMA).

Increasingly, research suggests that aging is a coordinated multi-system decline in functioning that occurs at multiple biological levels. We developed and validated a transcriptomic (RNA-based) aging measure we call Transcriptomic Mortality-risk Age (TraMA) using RNA-seq data from the 2016 Health and Retirement Study using elastic net Cox regression analyses to predict 4-year mortality hazard. In a holdout test sample, TraMA was associated with earlier mortality, more chronic conditions, poorer cognitive functioning, and more limitations in activities of daily living. TraMA was also externally validated in the Long Life Family Study and several publicly available datasets. Results suggest that TraMA is a robust, portable RNAseq-based aging measure that is comparable, but independent from past biological aging measures (e.g., GrimAge). TraMA is likely to be of particular value to researchers interested in understanding the biological processes underlying health and aging, and for social, psychological, epidemiological, and demographic studies of health and aging.

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来源期刊
Aging-Us
Aging-Us CELL BIOLOGY-
CiteScore
10.00
自引率
0.00%
发文量
595
审稿时长
6-12 weeks
期刊介绍: Information not localized
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