{"title":"生物发光层析成像残差图模型学习网络","authors":"De Wei;Yizhe Zhao;Shuangchen Li;Heng Zhang;Beilei Wang;Xiaowei He;Jingjing Yu;Huangjian Yi;Xuelei He;Hongbo Guo","doi":"10.1109/TCI.2025.3572727","DOIUrl":null,"url":null,"abstract":"For bioluminescence tomography reconstruction, regularization algorithms and deep learning frameworks have been widely studied and achieved impressive results. However, the parameter selection of the regularization algorithm and the poor interpretability of deep learning methods have become the key factors that affect the reconstruction results and hinder its applicability. To mitigate the effects of this problem, in this paper, we proposed a novel residual graph model learning network (RGMLN) for bioluminescence tomography reconstruction by combining the advantages of regularization method and deep learning. RGMLN is based on the inference process of the thresholding iterative shrinkage algorithm. The difference is that the penalty term of the regularization method was replaced by a learnable nonlinear mapping between the residual and source distributions to ensure the interpretability of network. Meanwhile, considering the non-Euclidean property of the finite element mesh, a graph convolution operation based on Laplacian graph theory was conducted to aggregate features of mesh nodes using the topological information of the tetrahedral mesh. Lastly, based on residual learning and auto-encoder strategies, gradient descent and prox mapping modules were designed to structure the model-driven RGMLN method to take advantage of both the interpretability of iterative techniques and the flexibility of learning methods. Both numerical and <italic>in vivo</i> experiments confirmed that the proposed network has excellent positioning accuracy and can be applied to different meshes and wavelengths.","PeriodicalId":56022,"journal":{"name":"IEEE Transactions on Computational Imaging","volume":"11 ","pages":"790-802"},"PeriodicalIF":4.8000,"publicationDate":"2025-06-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"RGMLN:Residual Graph Model Learning Network for Bioluminescence Tomography\",\"authors\":\"De Wei;Yizhe Zhao;Shuangchen Li;Heng Zhang;Beilei Wang;Xiaowei He;Jingjing Yu;Huangjian Yi;Xuelei He;Hongbo Guo\",\"doi\":\"10.1109/TCI.2025.3572727\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"For bioluminescence tomography reconstruction, regularization algorithms and deep learning frameworks have been widely studied and achieved impressive results. However, the parameter selection of the regularization algorithm and the poor interpretability of deep learning methods have become the key factors that affect the reconstruction results and hinder its applicability. To mitigate the effects of this problem, in this paper, we proposed a novel residual graph model learning network (RGMLN) for bioluminescence tomography reconstruction by combining the advantages of regularization method and deep learning. RGMLN is based on the inference process of the thresholding iterative shrinkage algorithm. The difference is that the penalty term of the regularization method was replaced by a learnable nonlinear mapping between the residual and source distributions to ensure the interpretability of network. Meanwhile, considering the non-Euclidean property of the finite element mesh, a graph convolution operation based on Laplacian graph theory was conducted to aggregate features of mesh nodes using the topological information of the tetrahedral mesh. Lastly, based on residual learning and auto-encoder strategies, gradient descent and prox mapping modules were designed to structure the model-driven RGMLN method to take advantage of both the interpretability of iterative techniques and the flexibility of learning methods. Both numerical and <italic>in vivo</i> experiments confirmed that the proposed network has excellent positioning accuracy and can be applied to different meshes and wavelengths.\",\"PeriodicalId\":56022,\"journal\":{\"name\":\"IEEE Transactions on Computational Imaging\",\"volume\":\"11 \",\"pages\":\"790-802\"},\"PeriodicalIF\":4.8000,\"publicationDate\":\"2025-06-02\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"IEEE Transactions on Computational Imaging\",\"FirstCategoryId\":\"94\",\"ListUrlMain\":\"https://ieeexplore.ieee.org/document/11020609/\",\"RegionNum\":2,\"RegionCategory\":\"计算机科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"ENGINEERING, ELECTRICAL & ELECTRONIC\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"IEEE Transactions on Computational Imaging","FirstCategoryId":"94","ListUrlMain":"https://ieeexplore.ieee.org/document/11020609/","RegionNum":2,"RegionCategory":"计算机科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"ENGINEERING, ELECTRICAL & ELECTRONIC","Score":null,"Total":0}
RGMLN:Residual Graph Model Learning Network for Bioluminescence Tomography
For bioluminescence tomography reconstruction, regularization algorithms and deep learning frameworks have been widely studied and achieved impressive results. However, the parameter selection of the regularization algorithm and the poor interpretability of deep learning methods have become the key factors that affect the reconstruction results and hinder its applicability. To mitigate the effects of this problem, in this paper, we proposed a novel residual graph model learning network (RGMLN) for bioluminescence tomography reconstruction by combining the advantages of regularization method and deep learning. RGMLN is based on the inference process of the thresholding iterative shrinkage algorithm. The difference is that the penalty term of the regularization method was replaced by a learnable nonlinear mapping between the residual and source distributions to ensure the interpretability of network. Meanwhile, considering the non-Euclidean property of the finite element mesh, a graph convolution operation based on Laplacian graph theory was conducted to aggregate features of mesh nodes using the topological information of the tetrahedral mesh. Lastly, based on residual learning and auto-encoder strategies, gradient descent and prox mapping modules were designed to structure the model-driven RGMLN method to take advantage of both the interpretability of iterative techniques and the flexibility of learning methods. Both numerical and in vivo experiments confirmed that the proposed network has excellent positioning accuracy and can be applied to different meshes and wavelengths.
期刊介绍:
The IEEE Transactions on Computational Imaging will publish articles where computation plays an integral role in the image formation process. Papers will cover all areas of computational imaging ranging from fundamental theoretical methods to the latest innovative computational imaging system designs. Topics of interest will include advanced algorithms and mathematical techniques, model-based data inversion, methods for image and signal recovery from sparse and incomplete data, techniques for non-traditional sensing of image data, methods for dynamic information acquisition and extraction from imaging sensors, software and hardware for efficient computation in imaging systems, and highly novel imaging system design.