{"title":"光系统II水氧化配合物出氧过程的时间分辨红外光谱研究","authors":"Kiichi Sugie, Yuki Kato, Ryo Nagao, Takumi Noguchi","doi":"10.1021/acs.jpcb.5c02806","DOIUrl":null,"url":null,"abstract":"<p><p>The molecular mechanism of photosynthetic water oxidation in photosystem II was investigated, focusing on the elusive O<sub>2</sub>-evolving S<sub>3</sub> → S<sub>0</sub> transition using time-resolved infrared spectroscopy, supported by quantum mechanics/molecular mechanics calculations. It was suggested that the initial ∼ 200 μs phase, which was significantly retarded by Cl<sup>-</sup> → NO<sub>3</sub><sup>-</sup> substitution but not much by Ca<sup>2+</sup> → Sr<sup>2+</sup> substitution, is attributed to proton release from W1, promoted by Y<sub>Z</sub> oxidation, via the Cl-1 channel. The resultant W1 = OH<sup>-</sup> form is in thermal equilibrium with the W2 = OH<sup>-</sup> form. The slow millisecond phase was significantly retarded by both Sr<sup>2+</sup> and NO<sub>3</sub><sup>-</sup> substitutions, maintaining electron transfer to Y<sub>Z</sub><sup>•</sup> as the rate-limiting step even in very slow kinetics with simultaneous Sr<sup>2+</sup>/NO<sub>3</sub><sup>-</sup> substitution, indicating that the hydrogen-bond network of water molecules between the Cl and Ca sites plays a crucial role in the electron transfer to form the transient S<sub>4</sub> state. It is proposed that electron transfer is coupled with internal proton transfer from O6H<sup>-</sup> to W2(OH<sup>-</sup>) through this hydrogen-bond network. These results highlight the key role of the hydrogen-bond network in the catalytic site in the molecular mechanism of the O<sub>2</sub>-evolving process, the slowest step in photosynthetic water oxidation.</p>","PeriodicalId":60,"journal":{"name":"The Journal of Physical Chemistry B","volume":" ","pages":"6172-6187"},"PeriodicalIF":2.8000,"publicationDate":"2025-06-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Mechanism of the Oxygen-Evolving Process in the Water-Oxidizing Complex of Photosystem II, as Revealed by Time-Resolved Infrared Spectroscopy.\",\"authors\":\"Kiichi Sugie, Yuki Kato, Ryo Nagao, Takumi Noguchi\",\"doi\":\"10.1021/acs.jpcb.5c02806\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>The molecular mechanism of photosynthetic water oxidation in photosystem II was investigated, focusing on the elusive O<sub>2</sub>-evolving S<sub>3</sub> → S<sub>0</sub> transition using time-resolved infrared spectroscopy, supported by quantum mechanics/molecular mechanics calculations. It was suggested that the initial ∼ 200 μs phase, which was significantly retarded by Cl<sup>-</sup> → NO<sub>3</sub><sup>-</sup> substitution but not much by Ca<sup>2+</sup> → Sr<sup>2+</sup> substitution, is attributed to proton release from W1, promoted by Y<sub>Z</sub> oxidation, via the Cl-1 channel. The resultant W1 = OH<sup>-</sup> form is in thermal equilibrium with the W2 = OH<sup>-</sup> form. The slow millisecond phase was significantly retarded by both Sr<sup>2+</sup> and NO<sub>3</sub><sup>-</sup> substitutions, maintaining electron transfer to Y<sub>Z</sub><sup>•</sup> as the rate-limiting step even in very slow kinetics with simultaneous Sr<sup>2+</sup>/NO<sub>3</sub><sup>-</sup> substitution, indicating that the hydrogen-bond network of water molecules between the Cl and Ca sites plays a crucial role in the electron transfer to form the transient S<sub>4</sub> state. It is proposed that electron transfer is coupled with internal proton transfer from O6H<sup>-</sup> to W2(OH<sup>-</sup>) through this hydrogen-bond network. These results highlight the key role of the hydrogen-bond network in the catalytic site in the molecular mechanism of the O<sub>2</sub>-evolving process, the slowest step in photosynthetic water oxidation.</p>\",\"PeriodicalId\":60,\"journal\":{\"name\":\"The Journal of Physical Chemistry B\",\"volume\":\" \",\"pages\":\"6172-6187\"},\"PeriodicalIF\":2.8000,\"publicationDate\":\"2025-06-26\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"The Journal of Physical Chemistry B\",\"FirstCategoryId\":\"1\",\"ListUrlMain\":\"https://doi.org/10.1021/acs.jpcb.5c02806\",\"RegionNum\":2,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2025/6/11 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"Q3\",\"JCRName\":\"CHEMISTRY, PHYSICAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"The Journal of Physical Chemistry B","FirstCategoryId":"1","ListUrlMain":"https://doi.org/10.1021/acs.jpcb.5c02806","RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/6/11 0:00:00","PubModel":"Epub","JCR":"Q3","JCRName":"CHEMISTRY, PHYSICAL","Score":null,"Total":0}
Mechanism of the Oxygen-Evolving Process in the Water-Oxidizing Complex of Photosystem II, as Revealed by Time-Resolved Infrared Spectroscopy.
The molecular mechanism of photosynthetic water oxidation in photosystem II was investigated, focusing on the elusive O2-evolving S3 → S0 transition using time-resolved infrared spectroscopy, supported by quantum mechanics/molecular mechanics calculations. It was suggested that the initial ∼ 200 μs phase, which was significantly retarded by Cl- → NO3- substitution but not much by Ca2+ → Sr2+ substitution, is attributed to proton release from W1, promoted by YZ oxidation, via the Cl-1 channel. The resultant W1 = OH- form is in thermal equilibrium with the W2 = OH- form. The slow millisecond phase was significantly retarded by both Sr2+ and NO3- substitutions, maintaining electron transfer to YZ• as the rate-limiting step even in very slow kinetics with simultaneous Sr2+/NO3- substitution, indicating that the hydrogen-bond network of water molecules between the Cl and Ca sites plays a crucial role in the electron transfer to form the transient S4 state. It is proposed that electron transfer is coupled with internal proton transfer from O6H- to W2(OH-) through this hydrogen-bond network. These results highlight the key role of the hydrogen-bond network in the catalytic site in the molecular mechanism of the O2-evolving process, the slowest step in photosynthetic water oxidation.
期刊介绍:
An essential criterion for acceptance of research articles in the journal is that they provide new physical insight. Please refer to the New Physical Insights virtual issue on what constitutes new physical insight. Manuscripts that are essentially reporting data or applications of data are, in general, not suitable for publication in JPC B.