Felipe Vilicich, Dhanya Vettiatil, Seth Kattapong-Graber, Nadiya Nawsheen, Neel Patel, Alexandra Quezada, Elizabeth Gurney, Emma Smith, Hallie N. Nelson, Susan Pesci, Jessica Atrio, Nadjeda Moreno, Aragorn Jones, Melinda Murphy, Nerys Benfield, Jon Hennebold, Nita Solanky, Steven Lisgo, Ian Glass, Birth Defects Research Laboratory (BDRL), Simone Sidoli
{"title":"猴胎和人新皮层细胞外成分的多组学鉴定。","authors":"Felipe Vilicich, Dhanya Vettiatil, Seth Kattapong-Graber, Nadiya Nawsheen, Neel Patel, Alexandra Quezada, Elizabeth Gurney, Emma Smith, Hallie N. Nelson, Susan Pesci, Jessica Atrio, Nadjeda Moreno, Aragorn Jones, Melinda Murphy, Nerys Benfield, Jon Hennebold, Nita Solanky, Steven Lisgo, Ian Glass, Birth Defects Research Laboratory (BDRL), Simone Sidoli","doi":"10.1002/pmic.202400385","DOIUrl":null,"url":null,"abstract":"<div>\n \n <p>During development, precursor cells are continuously and intimately interacting with their extracellular environment, which guides their ability to generate functional tissues and organs. Much is known about the development of the neocortex in mammals. This information has largely been derived from histological analyses, heterochronic cell transplants, and genetic manipulations in mice, and to a lesser extent from transcriptomic and histological analyses in humans. However, these approaches have not led to a characterization of the extracellular composition of the developing neocortex in any species. Here, using a combination of single-cell transcriptomic analyses from published datasets and our proteomics and immunohistofluorescence analyses, we provide a more comprehensive and unbiased picture of the early developing fetal neocortex in humans and non-human primates. Our findings provide a starting point for further hypothesis-driven studies on structural and signaling components in the developing cortex that had previously not been identified.</p>\n </div>","PeriodicalId":224,"journal":{"name":"Proteomics","volume":"25 13","pages":""},"PeriodicalIF":3.9000,"publicationDate":"2025-06-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Multi-Omics Identification of Extracellular Components of the Fetal Monkey and Human Neocortex\",\"authors\":\"Felipe Vilicich, Dhanya Vettiatil, Seth Kattapong-Graber, Nadiya Nawsheen, Neel Patel, Alexandra Quezada, Elizabeth Gurney, Emma Smith, Hallie N. Nelson, Susan Pesci, Jessica Atrio, Nadjeda Moreno, Aragorn Jones, Melinda Murphy, Nerys Benfield, Jon Hennebold, Nita Solanky, Steven Lisgo, Ian Glass, Birth Defects Research Laboratory (BDRL), Simone Sidoli\",\"doi\":\"10.1002/pmic.202400385\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div>\\n \\n <p>During development, precursor cells are continuously and intimately interacting with their extracellular environment, which guides their ability to generate functional tissues and organs. Much is known about the development of the neocortex in mammals. This information has largely been derived from histological analyses, heterochronic cell transplants, and genetic manipulations in mice, and to a lesser extent from transcriptomic and histological analyses in humans. However, these approaches have not led to a characterization of the extracellular composition of the developing neocortex in any species. Here, using a combination of single-cell transcriptomic analyses from published datasets and our proteomics and immunohistofluorescence analyses, we provide a more comprehensive and unbiased picture of the early developing fetal neocortex in humans and non-human primates. Our findings provide a starting point for further hypothesis-driven studies on structural and signaling components in the developing cortex that had previously not been identified.</p>\\n </div>\",\"PeriodicalId\":224,\"journal\":{\"name\":\"Proteomics\",\"volume\":\"25 13\",\"pages\":\"\"},\"PeriodicalIF\":3.9000,\"publicationDate\":\"2025-06-09\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Proteomics\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://analyticalsciencejournals.onlinelibrary.wiley.com/doi/10.1002/pmic.202400385\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"BIOCHEMICAL RESEARCH METHODS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Proteomics","FirstCategoryId":"99","ListUrlMain":"https://analyticalsciencejournals.onlinelibrary.wiley.com/doi/10.1002/pmic.202400385","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOCHEMICAL RESEARCH METHODS","Score":null,"Total":0}
Multi-Omics Identification of Extracellular Components of the Fetal Monkey and Human Neocortex
During development, precursor cells are continuously and intimately interacting with their extracellular environment, which guides their ability to generate functional tissues and organs. Much is known about the development of the neocortex in mammals. This information has largely been derived from histological analyses, heterochronic cell transplants, and genetic manipulations in mice, and to a lesser extent from transcriptomic and histological analyses in humans. However, these approaches have not led to a characterization of the extracellular composition of the developing neocortex in any species. Here, using a combination of single-cell transcriptomic analyses from published datasets and our proteomics and immunohistofluorescence analyses, we provide a more comprehensive and unbiased picture of the early developing fetal neocortex in humans and non-human primates. Our findings provide a starting point for further hypothesis-driven studies on structural and signaling components in the developing cortex that had previously not been identified.
期刊介绍:
PROTEOMICS is the premier international source for information on all aspects of applications and technologies, including software, in proteomics and other "omics". The journal includes but is not limited to proteomics, genomics, transcriptomics, metabolomics and lipidomics, and systems biology approaches. Papers describing novel applications of proteomics and integration of multi-omics data and approaches are especially welcome.