衰减不确定性:利用拉格朗日输运模型探索衰减率变异在海洋eDNA扩散中的作用

Q1 Agricultural and Biological Sciences
Mohamed Yosri Zanni, Verena M. Trenkel, Robin Faillettaz
{"title":"衰减不确定性:利用拉格朗日输运模型探索衰减率变异在海洋eDNA扩散中的作用","authors":"Mohamed Yosri Zanni,&nbsp;Verena M. Trenkel,&nbsp;Robin Faillettaz","doi":"10.1002/edn3.70140","DOIUrl":null,"url":null,"abstract":"<p>Environmental DNA (eDNA) has emerged as a powerful tool for fisheries management and biodiversity monitoring, offering novel insights into marine ecosystems. However, linking eDNA concentrations to species abundance remains a significant challenge. Limited understanding of the biotic and abiotic factors influencing eDNA production, decay, and transport in marine environments continues to hinder its broader application. This study aims to address these gaps by modeling eDNA decay and transport dynamics using a Lagrangian particle tracking model, the Connectivity Modeling System. Specifically, we (1) fitted and implemented five temperature-dependent decay rate relationships and (2) simulated eDNA transport accounting for temperature-dependent decay rate variability. We modeled eDNA dispersal at three contrasting locations in the Bay of Biscay, Northeast Atlantic, over a full year under the five decay rate scenarios. For eDNA transport, current velocity was the most important factor, followed by the decay rate relationship, while the converse effects were found for eDNA dispersion and lifetime. Temperature was found to have the least impact on transport variability. On average, eDNA persisted between 5 and 30 h, with transport distances varying between 0.3 km and 39.1 km, depending on location, month, decay rate, and depth. Our results emphasize the need for precise decay rate estimates, tailored to species-specific and encountered temperature conditions, to enhance the power of eDNA-based monitoring.</p>","PeriodicalId":52828,"journal":{"name":"Environmental DNA","volume":"7 3","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2025-06-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/edn3.70140","citationCount":"0","resultStr":"{\"title\":\"Decaying Uncertainties: Exploring the Role of Decay Rate Variability in Marine eDNA Dispersal Using Lagrangian Transport Modeling\",\"authors\":\"Mohamed Yosri Zanni,&nbsp;Verena M. Trenkel,&nbsp;Robin Faillettaz\",\"doi\":\"10.1002/edn3.70140\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>Environmental DNA (eDNA) has emerged as a powerful tool for fisheries management and biodiversity monitoring, offering novel insights into marine ecosystems. However, linking eDNA concentrations to species abundance remains a significant challenge. Limited understanding of the biotic and abiotic factors influencing eDNA production, decay, and transport in marine environments continues to hinder its broader application. This study aims to address these gaps by modeling eDNA decay and transport dynamics using a Lagrangian particle tracking model, the Connectivity Modeling System. Specifically, we (1) fitted and implemented five temperature-dependent decay rate relationships and (2) simulated eDNA transport accounting for temperature-dependent decay rate variability. We modeled eDNA dispersal at three contrasting locations in the Bay of Biscay, Northeast Atlantic, over a full year under the five decay rate scenarios. For eDNA transport, current velocity was the most important factor, followed by the decay rate relationship, while the converse effects were found for eDNA dispersion and lifetime. Temperature was found to have the least impact on transport variability. On average, eDNA persisted between 5 and 30 h, with transport distances varying between 0.3 km and 39.1 km, depending on location, month, decay rate, and depth. Our results emphasize the need for precise decay rate estimates, tailored to species-specific and encountered temperature conditions, to enhance the power of eDNA-based monitoring.</p>\",\"PeriodicalId\":52828,\"journal\":{\"name\":\"Environmental DNA\",\"volume\":\"7 3\",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2025-06-10\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://onlinelibrary.wiley.com/doi/epdf/10.1002/edn3.70140\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Environmental DNA\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://onlinelibrary.wiley.com/doi/10.1002/edn3.70140\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"Agricultural and Biological Sciences\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Environmental DNA","FirstCategoryId":"1085","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/edn3.70140","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"Agricultural and Biological Sciences","Score":null,"Total":0}
引用次数: 0

摘要

环境DNA (Environmental DNA, eDNA)已成为渔业管理和生物多样性监测的有力工具,为海洋生态系统提供了新的见解。然而,将eDNA浓度与物种丰度联系起来仍然是一个重大挑战。对海洋环境中影响eDNA产生、衰变和运输的生物和非生物因素的了解有限,继续阻碍其更广泛的应用。本研究旨在通过使用拉格朗日粒子跟踪模型(连接建模系统)建模eDNA衰变和传输动力学来解决这些空白。具体来说,我们(1)拟合并实现了五种温度相关的衰减率关系,(2)模拟了eDNA运输,考虑了温度相关的衰减率变异性。我们在东北大西洋比斯开湾的三个不同地点模拟了eDNA在五种衰减率情景下一整年的扩散。对于eDNA的传输,电流速度是最重要的因素,其次是衰减率关系,而eDNA的分散和寿命则相反。温度对输运变率的影响最小。eDNA的平均持续时间为5至30小时,传输距离在0.3公里至39.1公里之间,具体取决于地点、月份、衰减率和深度。我们的研究结果强调需要精确的衰变率估计,根据物种特异性和遇到的温度条件量身定制,以增强基于edna的监测能力。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Decaying Uncertainties: Exploring the Role of Decay Rate Variability in Marine eDNA Dispersal Using Lagrangian Transport Modeling

Environmental DNA (eDNA) has emerged as a powerful tool for fisheries management and biodiversity monitoring, offering novel insights into marine ecosystems. However, linking eDNA concentrations to species abundance remains a significant challenge. Limited understanding of the biotic and abiotic factors influencing eDNA production, decay, and transport in marine environments continues to hinder its broader application. This study aims to address these gaps by modeling eDNA decay and transport dynamics using a Lagrangian particle tracking model, the Connectivity Modeling System. Specifically, we (1) fitted and implemented five temperature-dependent decay rate relationships and (2) simulated eDNA transport accounting for temperature-dependent decay rate variability. We modeled eDNA dispersal at three contrasting locations in the Bay of Biscay, Northeast Atlantic, over a full year under the five decay rate scenarios. For eDNA transport, current velocity was the most important factor, followed by the decay rate relationship, while the converse effects were found for eDNA dispersion and lifetime. Temperature was found to have the least impact on transport variability. On average, eDNA persisted between 5 and 30 h, with transport distances varying between 0.3 km and 39.1 km, depending on location, month, decay rate, and depth. Our results emphasize the need for precise decay rate estimates, tailored to species-specific and encountered temperature conditions, to enhance the power of eDNA-based monitoring.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Environmental DNA
Environmental DNA Agricultural and Biological Sciences-Ecology, Evolution, Behavior and Systematics
CiteScore
11.00
自引率
0.00%
发文量
99
审稿时长
16 weeks
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信