{"title":"基于并行编码器U-net的PET/MRI宫颈肿瘤自动分割。","authors":"Shuai Liu, Zheng Tan, Tan Gong, Xiaoying Tang, Hongzan Sun, Fei Shang","doi":"10.1186/s13014-025-02664-1","DOIUrl":null,"url":null,"abstract":"<p><strong>Background: </strong>Automatic segmentation of cervical tumors is important in quantitative analysis and radiotherapy planning.</p><p><strong>Methods: </strong>A parallel encoder U-Net (PEU-Net) integrating the multi-modality information of PET/MRI was proposed to segment cervical tumor, which consisted of two parallel encoders with the same structure for PET and MR images. The features of the two modalities were extracted separately and fused at each layer of the decoder. Res2Net module on skip connection aggregated the features of various scales and refined the segmentation performance. PET/MRI images of 165 patients with cervical cancer were included in this study. U-Net, TransUNet, and nnU-Net with single or multi-modality (PET or/and T2WI) input were used for comparison. The Dice similarity coefficient (DSC) with volume data, DSC and the 95th percentile of Hausdorff distance (HD95) with tumor slices were calculated to evaluate the performance.</p><p><strong>Results: </strong>The proposed PEU-Net exhibited the best performance (DSC<sub>3d</sub>: 0.726 ± 0.204, HD<sub>95</sub>: 4.603 ± 4.579 mm), DSC<sub>2d</sub> (0.871 ± 0.113) was comparable to the best result of TransUNet with PET/MRI (0.873 ± 0.125).</p><p><strong>Conclusions: </strong>The networks with multi-modality input outperformed those with single-modality images as input. 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The features of the two modalities were extracted separately and fused at each layer of the decoder. Res2Net module on skip connection aggregated the features of various scales and refined the segmentation performance. PET/MRI images of 165 patients with cervical cancer were included in this study. U-Net, TransUNet, and nnU-Net with single or multi-modality (PET or/and T2WI) input were used for comparison. The Dice similarity coefficient (DSC) with volume data, DSC and the 95th percentile of Hausdorff distance (HD95) with tumor slices were calculated to evaluate the performance.</p><p><strong>Results: </strong>The proposed PEU-Net exhibited the best performance (DSC<sub>3d</sub>: 0.726 ± 0.204, HD<sub>95</sub>: 4.603 ± 4.579 mm), DSC<sub>2d</sub> (0.871 ± 0.113) was comparable to the best result of TransUNet with PET/MRI (0.873 ± 0.125).</p><p><strong>Conclusions: </strong>The networks with multi-modality input outperformed those with single-modality images as input. 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引用次数: 0
摘要
背景:宫颈肿瘤自动分割在定量分析和放疗规划中具有重要意义。方法:提出了一种融合PET/MRI多模态信息的并行编码器U-Net (PEU-Net),该编码器由两个结构相同的并行编码器组成,用于PET和MR图像的分割。分别提取两种模态的特征,并在解码器的每一层进行融合。基于跳跃连接的Res2Net模块聚合了各种尺度的特征,改进了分割性能。本研究纳入了165例宫颈癌患者的PET/MRI图像。U-Net、TransUNet和nnU-Net采用单或多模态(PET或/和T2WI)输入进行比较。计算与体积数据的Dice相似系数(DSC)、与肿瘤切片的DSC及Hausdorff距离的第95百分位(HD95)来评价其性能。结果:PEU-Net表现最佳(DSC3d: 0.726±0.204 mm, HD95: 4.603±4.579 mm), DSC2d(0.871±0.113)与TransUNet结合PET/MRI的最佳结果(0.873±0.125)相当。结论:多模态输入的神经网络优于单模态输入的神经网络。结果表明,通过结构的重新设计,所提出的PEU-Net可以更有效地利用多模态信息,并取得了较好的性能。
Automatic cervical tumors segmentation in PET/MRI by parallel encoder U-net.
Background: Automatic segmentation of cervical tumors is important in quantitative analysis and radiotherapy planning.
Methods: A parallel encoder U-Net (PEU-Net) integrating the multi-modality information of PET/MRI was proposed to segment cervical tumor, which consisted of two parallel encoders with the same structure for PET and MR images. The features of the two modalities were extracted separately and fused at each layer of the decoder. Res2Net module on skip connection aggregated the features of various scales and refined the segmentation performance. PET/MRI images of 165 patients with cervical cancer were included in this study. U-Net, TransUNet, and nnU-Net with single or multi-modality (PET or/and T2WI) input were used for comparison. The Dice similarity coefficient (DSC) with volume data, DSC and the 95th percentile of Hausdorff distance (HD95) with tumor slices were calculated to evaluate the performance.
Results: The proposed PEU-Net exhibited the best performance (DSC3d: 0.726 ± 0.204, HD95: 4.603 ± 4.579 mm), DSC2d (0.871 ± 0.113) was comparable to the best result of TransUNet with PET/MRI (0.873 ± 0.125).
Conclusions: The networks with multi-modality input outperformed those with single-modality images as input. The results showed that the proposed PEU-Net could use multi-modality information more effectively through the redesigned structure and achieved competitive performance.
Radiation OncologyONCOLOGY-RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING
CiteScore
6.50
自引率
2.80%
发文量
181
审稿时长
3-6 weeks
期刊介绍:
Radiation Oncology encompasses all aspects of research that impacts on the treatment of cancer using radiation. It publishes findings in molecular and cellular radiation biology, radiation physics, radiation technology, and clinical oncology.