绵羊垂体高繁殖力基因的纳米孔测序研究。

IF 3.5 2区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
Xue Xiao, Zhibin Ji, Tong Wang, Dejie Zhu, Zhonghui Li, Xinming Xu, Fen Li
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引用次数: 0

摘要

背景:生殖是一个复杂的过程,受许多次要基因和一些主要基因遗传的影响。脑下垂体是绵羊重要的内分泌器官,主要通过激素的合成和分泌来调节发情和繁殖。以往对绵羊生殖性状的研究主要集中在不同繁殖力的绵羊的卵泡发生和排卵方面,对垂体中表达的mrna的系统分析较少。为探索绵羊生殖性状的内在分子调控机制和基因调控网络,筛选影响排卵数、产仔数等多个胎儿性状的关键基因,为绵羊生殖性状的研究提供新的参考。结果:本研究选取健康小尾寒羊3只,健康瓦地羊3只,分别组成高繁殖组(小尾寒羊,HP组)和低繁殖组(瓦地羊,LP组)。采用ONT全长转录组测序技术进行mRNA鉴定、筛选和功能分析。在两组绵羊之间共发现7123个deg,其中HP组中有3551个基因上调,3572个基因下调。筛选的基因PRKACB、MAPK1、CAMK2D、PIK3CB、GNAI3、RAC1、PTK2、ITGB1、PRKCB、MAPK10、MAPK13的表达在HP组和LP组之间存在显著差异。与垂体功能和生殖相关的GO和KEGG术语被丰富,包括生殖过程、刺激反应、突触以及mTOR信号通路、PI3K-Akt信号通路、cAMP信号通路、ERK1/2信号通路和MAPK信号通路。结论:我们的研究结果清楚地表明,检测到的deg参与了组织器官形态结构的发育以及内分泌系统激素的分泌,为阐明绵羊高繁殖的遗传机制提供了科学依据。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Investigation of high fecundity genes by nanopore sequencing in sheep (Ovis aries) pituitary.

Background: Reproduction is a complex process, which is influenced by the inheritance of many minor genes and some major genes. The pituitary gland is an important endocrine organ that regulates estrus and reproduction in sheep mainly through hormone synthesis and secretion. Previous studies on reproduction traits have focused mainly on folliculogenesis and ovulation in sheep with different fecundities, and few systematic analyses of the mRNAs expressed in the pituitary have been performed. To explore the intrinsic molecular regulatory mechanisms and gene regulatory network of sheep reproductive traits, key genes affecting multiple fetal traits, such as ovulation number and litter size, were screened to provide a new reference for the study of reproduction traits in sheep.

Result: In this study, three healthy small-tailed Han sheep and three healthy Wadi sheep were selected respectively to form a high-reproduction group (small-tailed Han sheep, HP group) and a low-reproduction group (Wadi sheep, LP group). ONT full-length transcriptome sequencing technology was used for mRNA identification, screening, and functional analysis. A total of 7,123 DEGs were found between the two groups of sheep, including 3,551 genes that were upregulated and 3,572 genes that were downregulated in the HP group. The expression of screened genes PRKACB, MAPK1, CAMK2D, PIK3CB, GNAI3, RAC1, PTK2, ITGB1, PRKCB, MAPK10, and MAPK13 significantly differed between the HP and LP groups. GO and KEGG terms related to pituitary function and reproduction were enriched, including reproductive processes, responses to stimuli, and synapses, as well as the mTOR signaling pathway, PI3K-Akt signaling pathway, cAMP signaling pathway, ERK1/2 signaling pathways and MAPK signaling pathways.

Conclusions: Our results clearly indicate that the DEGs detected were involved in the development of morphology and structure of tissues and organs, as well as the secretion of hormones in the endocrine system, which could provide a scientific basis for elucidating the genetic mechanisms of high reproduction in sheep.

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来源期刊
BMC Genomics
BMC Genomics 生物-生物工程与应用微生物
CiteScore
7.40
自引率
4.50%
发文量
769
审稿时长
6.4 months
期刊介绍: BMC Genomics is an open access, peer-reviewed journal that considers articles on all aspects of genome-scale analysis, functional genomics, and proteomics. BMC Genomics is part of the BMC series which publishes subject-specific journals focused on the needs of individual research communities across all areas of biology and medicine. We offer an efficient, fair and friendly peer review service, and are committed to publishing all sound science, provided that there is some advance in knowledge presented by the work.
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