Rowan McDonough, Charlotte C Williams, Carol J Hartley, Nigel G French, Colin Scott, David A Lewis
{"title":"纳米二氧化硅系缚增强NADH/NAD+的热稳定性。","authors":"Rowan McDonough, Charlotte C Williams, Carol J Hartley, Nigel G French, Colin Scott, David A Lewis","doi":"10.1021/acssynbio.5c00348","DOIUrl":null,"url":null,"abstract":"<p><p>The poor thermal stability of the cofactor β-nicotinamide adenine dinucleotide (NAD<sup>+</sup>) in industrial settings can be a limiting factor in the expansion of biosynthetic approaches to chemical production. In this work, we report that the half-life of SiNP-tethered NAD<sup>+</sup> when stored in solution at 37 °C, and subsequently catalyzed by glycerol-3-phosphate dehydrogenase from <i>E. coli</i> (EcG3PD) at ambient temperature, is increased 11-fold to over 500 h, compared with 34.5 h for free NAD<sup>+</sup>. Similarly, the half-life for the degradation of the tethered NAD<sup>+</sup> stored at 100 °C was 5 h compared with 0.3 h for free NAD<sup>+</sup> corresponding to a 15-fold enhancement in the retention of activity of tethered NAD<sup>+</sup>. Kinetic analysis indicates that activity loss of NAD<sup>+</sup> is similar to that of the normal hydrolysis mechanism, with the difference likely being due to steric effects and access to labile bonds. We also demonstrated that the retention of reactivity of heat-treated EcG3PD adsorbed to the surface NAD<sup>+</sup>-functionalized particles was improved compared to freely diffusing EcG3PD and NAD<sup>+</sup> at ambient temperature, consistent with our previous work which showed a surface-localized enzyme/substrate interaction resulting in a concentrating effect. These results demonstrate the great potential for the long-term use of tethered NAD<sup>+</sup> and enzymes, even at high operational temperatures, in biocatalytic applications.</p>","PeriodicalId":26,"journal":{"name":"ACS Synthetic Biology","volume":" ","pages":"2368-2374"},"PeriodicalIF":3.9000,"publicationDate":"2025-06-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Enhanced Thermal Stability of NADH/NAD<sup>+</sup> through Tethering to Silica Nanoparticles.\",\"authors\":\"Rowan McDonough, Charlotte C Williams, Carol J Hartley, Nigel G French, Colin Scott, David A Lewis\",\"doi\":\"10.1021/acssynbio.5c00348\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>The poor thermal stability of the cofactor β-nicotinamide adenine dinucleotide (NAD<sup>+</sup>) in industrial settings can be a limiting factor in the expansion of biosynthetic approaches to chemical production. In this work, we report that the half-life of SiNP-tethered NAD<sup>+</sup> when stored in solution at 37 °C, and subsequently catalyzed by glycerol-3-phosphate dehydrogenase from <i>E. coli</i> (EcG3PD) at ambient temperature, is increased 11-fold to over 500 h, compared with 34.5 h for free NAD<sup>+</sup>. Similarly, the half-life for the degradation of the tethered NAD<sup>+</sup> stored at 100 °C was 5 h compared with 0.3 h for free NAD<sup>+</sup> corresponding to a 15-fold enhancement in the retention of activity of tethered NAD<sup>+</sup>. Kinetic analysis indicates that activity loss of NAD<sup>+</sup> is similar to that of the normal hydrolysis mechanism, with the difference likely being due to steric effects and access to labile bonds. We also demonstrated that the retention of reactivity of heat-treated EcG3PD adsorbed to the surface NAD<sup>+</sup>-functionalized particles was improved compared to freely diffusing EcG3PD and NAD<sup>+</sup> at ambient temperature, consistent with our previous work which showed a surface-localized enzyme/substrate interaction resulting in a concentrating effect. These results demonstrate the great potential for the long-term use of tethered NAD<sup>+</sup> and enzymes, even at high operational temperatures, in biocatalytic applications.</p>\",\"PeriodicalId\":26,\"journal\":{\"name\":\"ACS Synthetic Biology\",\"volume\":\" \",\"pages\":\"2368-2374\"},\"PeriodicalIF\":3.9000,\"publicationDate\":\"2025-06-20\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"ACS Synthetic Biology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1021/acssynbio.5c00348\",\"RegionNum\":2,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2025/6/4 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"Q1\",\"JCRName\":\"BIOCHEMICAL RESEARCH METHODS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"ACS Synthetic Biology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1021/acssynbio.5c00348","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/6/4 0:00:00","PubModel":"Epub","JCR":"Q1","JCRName":"BIOCHEMICAL RESEARCH METHODS","Score":null,"Total":0}
Enhanced Thermal Stability of NADH/NAD+ through Tethering to Silica Nanoparticles.
The poor thermal stability of the cofactor β-nicotinamide adenine dinucleotide (NAD+) in industrial settings can be a limiting factor in the expansion of biosynthetic approaches to chemical production. In this work, we report that the half-life of SiNP-tethered NAD+ when stored in solution at 37 °C, and subsequently catalyzed by glycerol-3-phosphate dehydrogenase from E. coli (EcG3PD) at ambient temperature, is increased 11-fold to over 500 h, compared with 34.5 h for free NAD+. Similarly, the half-life for the degradation of the tethered NAD+ stored at 100 °C was 5 h compared with 0.3 h for free NAD+ corresponding to a 15-fold enhancement in the retention of activity of tethered NAD+. Kinetic analysis indicates that activity loss of NAD+ is similar to that of the normal hydrolysis mechanism, with the difference likely being due to steric effects and access to labile bonds. We also demonstrated that the retention of reactivity of heat-treated EcG3PD adsorbed to the surface NAD+-functionalized particles was improved compared to freely diffusing EcG3PD and NAD+ at ambient temperature, consistent with our previous work which showed a surface-localized enzyme/substrate interaction resulting in a concentrating effect. These results demonstrate the great potential for the long-term use of tethered NAD+ and enzymes, even at high operational temperatures, in biocatalytic applications.
期刊介绍:
The journal is particularly interested in studies on the design and synthesis of new genetic circuits and gene products; computational methods in the design of systems; and integrative applied approaches to understanding disease and metabolism.
Topics may include, but are not limited to:
Design and optimization of genetic systems
Genetic circuit design and their principles for their organization into programs
Computational methods to aid the design of genetic systems
Experimental methods to quantify genetic parts, circuits, and metabolic fluxes
Genetic parts libraries: their creation, analysis, and ontological representation
Protein engineering including computational design
Metabolic engineering and cellular manufacturing, including biomass conversion
Natural product access, engineering, and production
Creative and innovative applications of cellular programming
Medical applications, tissue engineering, and the programming of therapeutic cells
Minimal cell design and construction
Genomics and genome replacement strategies
Viral engineering
Automated and robotic assembly platforms for synthetic biology
DNA synthesis methodologies
Metagenomics and synthetic metagenomic analysis
Bioinformatics applied to gene discovery, chemoinformatics, and pathway construction
Gene optimization
Methods for genome-scale measurements of transcription and metabolomics
Systems biology and methods to integrate multiple data sources
in vitro and cell-free synthetic biology and molecular programming
Nucleic acid engineering.