癫痫治疗中丙戊酸实时预测的集成机器学习模型。

IF 2.2 3区 医学 Q2 PHARMACOLOGY & PHARMACY
Jiangchuan Xie, Pan Ma, Xinmei Pan, Liya Cao, Ruixiang Liu, Lirong Xiong, Hongqian Wang, Xin Zhang, Linli Xie, Yongchuan Chen
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引用次数: 0

摘要

建立通过机器学习预测丙戊酸(VPA)浓度的最优模型,确保VPA血浆浓度在有效治疗范围内,从而有效控制患者癫痫。这项单中心回顾性研究纳入了2014年1月至2022年1月诊断为癫痫的患者。接受VPA治疗并接受治疗药物监测的患者入组。选取模型性能较好的前3种算法建立集合预测模型,采用Shapley加性解释(SHAP)对模型进行解释。收集独立数据集作为临床验证组,以验证预测模型的性能。为集成模型选择的算法——光梯度增强、分类增强和梯度增强回归树——显示出较高的r2(分别为0.549、0.515和0.503)。在特征选择后,最终模型包含了20个变量,与考虑所有24个变量的模型相比,证明了更好的预测性能。外部验证的r2、平均绝对误差、均方误差、绝对准确度(±20 mg/L)和相对准确度(±20%)分别为0.621、10.67、221.50、78.98%和66.48%。使用SHAP值直观地表示每个变量的重要性和方向,其中VPA给药和肝功能成为最重要的因素。创新的应用程序利用先进的多算法挖掘方法来预测成人癫痫患者的VPA浓度。此外,它采用SHAP来阐明综合预测模型中每个特征的细微影响,从而为影响VPA浓度预测的决定因素提供可靠和合理的解释。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Ensemble Machine Learning Model for Real-Time Valproic Acid Prediction in Epilepsy Treatment.

To develop an optimal model to predict valproic acid (VPA) concentrations by machine learning, ensuring that the VPA plasma concentration is in the effective treatment range, and thus effectively control the patient's epilepsy.This single-center, retrospective study included patients diagnosed with epilepsy from January 2014 to January 2022. Patients receiving VPA and having undergone therapeutic drug monitoring were enrolled. Top three algorithms exhibiting superior model performance were selected to establish the ensemble prediction model, with Shapley Additive exPlanations (SHAP) employed for model interpretation. An independent dataset was collected as a clinical validation group to verify the prediction model performance.The algorithms chosen for the ensemble model-Light Gradient Boosting, Categorical Boosting, and Gradient Boosted Regression Trees-demonstrated high R 2 (0.549, 0.515, and 0.503, respectively). Post-feature selection, the final model incorporated 20 variables, proving superior in predictive performance compared to models considering all 24 variables. The R 2 , mean absolute error, mean square error, absolute accuracy (±20 mg/L), and relative accuracy (±20%) of external validation were 0.621, 10.67, 221.50, 78.98%, and 66.48%, respectively. The importance and direction of each variable were visually represented using SHAP values, with VPA administration and liver function emerging as the most significant factors.The innovative application harnesses advanced multi-algorithm mining methodologies to forecast VPA concentrations in adult epileptic patients. Furthermore, it employs SHAP to elucidate the nuanced influence of each feature within the integrated prediction model, thereby providing a robust and plausible explanation for the determinants affecting VPA concentration predictions.

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来源期刊
Pharmacopsychiatry
Pharmacopsychiatry 医学-精神病学
CiteScore
7.10
自引率
9.30%
发文量
54
审稿时长
6-12 weeks
期刊介绍: Covering advances in the fi eld of psychotropic drugs, Pharmaco psychiatry provides psychiatrists, neuroscientists and clinicians with key clinical insights and describes new avenues of research and treatment. The pharmacological and neurobiological bases of psychiatric disorders are discussed by presenting clinical and experimental research.
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