尖胃虫引起的胃炎(鞘翅目:葡萄球菌科:黄翅虫):用系统基因组学解决一个主要的分类障碍

IF 4.9 1区 农林科学 Q1 ENTOMOLOGY
Adam J. Brunke, Stylianos Chatzimanolis
{"title":"尖胃虫引起的胃炎(鞘翅目:葡萄球菌科:黄翅虫):用系统基因组学解决一个主要的分类障碍","authors":"Adam J. Brunke,&nbsp;Stylianos Chatzimanolis","doi":"10.1111/syen.12662","DOIUrl":null,"url":null,"abstract":"<p>With 334 species, the subtribe Xanthopygina forms a diverse and ecologically dominant component of the Neotropical beetle fauna, ranging from the southern United States south to Argentina. Species can be abundant in a variety of microhabitats and are frequently encountered in tropical forests. Although a number of morphologically distinct genera are now well defined and identifiable, the subtribe still suffers from several poorly defined genera with relatively generalized morphology. The worst of these is the genus <i>Gastrisus</i> Sharp, which has never had a morphological definition per se and has, over time, accumulated many morphologically disparate species. This nebulous concept of <i>Gastrisus</i> has further made it difficult to generically assign and describe new species. Here we assembled a phylogenomic dataset using anchored hybrid enrichment across a broad sample of Xanthopygina, including nearly all described genera, a representation of morphological variation within <i>Gastrisus</i> and a number of undescribed taxa we were unable to assign to a genus. Both maximum likelihood and coalescent analyses converged on a well resolved and stable topology for the subtribe, which will serve as a critical framework for continued taxonomic progress in Xanthopygina. Nine major lineages were identified, most congruent with previous work. The limits of <i>Gastrisus</i> were successfully identified, and the monophyletic core of the genus was recovered as sister to a redefined <i>Nausicotus</i> Sharp, which included <i>Torobus</i> syn. n. Several large species of <i>Gastrisus</i> were resolved as a clade of the <i>Xanthopygus</i> group and are here placed in <i>Drepanagrios</i> gen. n. An additional six new genera were discovered but will be described and treated in detail in future papers. In addition to <i>Gastrisus</i>, <i>Phanolinus</i> Sharp, <i>Xenopygus</i> Bernhauer, <i>Phanolinopsis</i> Scheerpeltz and <i>Ocyolinus</i> Sharp were recovered as paraphyletic, resulting in <i>Elecatopselaphus</i> syn. n. (<i>=Phanolinus</i>), the re-validation of <i>Leptodiastemus</i> Bernhauer stat. ressur. and the redefinition of <i>Xenopygus</i>, <i>Phanolinopsis</i> and <i>Ocyolinus</i>. We propose <i>Phanolinus scheerpeltzi</i> nom. n. as a replacement name for <i>Phanolinus peruvianus</i> (Scheerpeltz 1972, <i>nec</i> Bernhauer 1917) (previously <i>Elecatopselaphus</i>).</p>","PeriodicalId":22126,"journal":{"name":"Systematic Entomology","volume":"50 3","pages":"449-468"},"PeriodicalIF":4.9000,"publicationDate":"2024-12-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/syen.12662","citationCount":"0","resultStr":"{\"title\":\"Gastritis over Gastrisus Sharp (Coleoptera: Staphylinidae: Xanthopygina): Resolving a major taxonomic impediment with phylogenomics\",\"authors\":\"Adam J. Brunke,&nbsp;Stylianos Chatzimanolis\",\"doi\":\"10.1111/syen.12662\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>With 334 species, the subtribe Xanthopygina forms a diverse and ecologically dominant component of the Neotropical beetle fauna, ranging from the southern United States south to Argentina. Species can be abundant in a variety of microhabitats and are frequently encountered in tropical forests. Although a number of morphologically distinct genera are now well defined and identifiable, the subtribe still suffers from several poorly defined genera with relatively generalized morphology. The worst of these is the genus <i>Gastrisus</i> Sharp, which has never had a morphological definition per se and has, over time, accumulated many morphologically disparate species. This nebulous concept of <i>Gastrisus</i> has further made it difficult to generically assign and describe new species. Here we assembled a phylogenomic dataset using anchored hybrid enrichment across a broad sample of Xanthopygina, including nearly all described genera, a representation of morphological variation within <i>Gastrisus</i> and a number of undescribed taxa we were unable to assign to a genus. Both maximum likelihood and coalescent analyses converged on a well resolved and stable topology for the subtribe, which will serve as a critical framework for continued taxonomic progress in Xanthopygina. Nine major lineages were identified, most congruent with previous work. The limits of <i>Gastrisus</i> were successfully identified, and the monophyletic core of the genus was recovered as sister to a redefined <i>Nausicotus</i> Sharp, which included <i>Torobus</i> syn. n. Several large species of <i>Gastrisus</i> were resolved as a clade of the <i>Xanthopygus</i> group and are here placed in <i>Drepanagrios</i> gen. n. An additional six new genera were discovered but will be described and treated in detail in future papers. In addition to <i>Gastrisus</i>, <i>Phanolinus</i> Sharp, <i>Xenopygus</i> Bernhauer, <i>Phanolinopsis</i> Scheerpeltz and <i>Ocyolinus</i> Sharp were recovered as paraphyletic, resulting in <i>Elecatopselaphus</i> syn. n. (<i>=Phanolinus</i>), the re-validation of <i>Leptodiastemus</i> Bernhauer stat. ressur. and the redefinition of <i>Xenopygus</i>, <i>Phanolinopsis</i> and <i>Ocyolinus</i>. We propose <i>Phanolinus scheerpeltzi</i> nom. n. as a replacement name for <i>Phanolinus peruvianus</i> (Scheerpeltz 1972, <i>nec</i> Bernhauer 1917) (previously <i>Elecatopselaphus</i>).</p>\",\"PeriodicalId\":22126,\"journal\":{\"name\":\"Systematic Entomology\",\"volume\":\"50 3\",\"pages\":\"449-468\"},\"PeriodicalIF\":4.9000,\"publicationDate\":\"2024-12-11\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://onlinelibrary.wiley.com/doi/epdf/10.1111/syen.12662\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Systematic Entomology\",\"FirstCategoryId\":\"97\",\"ListUrlMain\":\"https://resjournals.onlinelibrary.wiley.com/doi/10.1111/syen.12662\",\"RegionNum\":1,\"RegionCategory\":\"农林科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"ENTOMOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Systematic Entomology","FirstCategoryId":"97","ListUrlMain":"https://resjournals.onlinelibrary.wiley.com/doi/10.1111/syen.12662","RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"ENTOMOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

Xanthopygina亚族共有334种,构成了从美国南部到阿根廷的新热带甲虫动物群中一个多样化和生态优势的组成部分。物种可以在各种微生境中丰富,并且经常在热带森林中遇到。虽然许多形态上不同的属现在已经被很好地定义和识别,但这个亚部落仍然有几个形态相对普遍的定义不清的属。其中最糟糕的是Gastrisus Sharp属,它本身从未有过形态学定义,而且随着时间的推移,积累了许多形态学上完全不同的物种。这一模糊的概念进一步使一般分配和描述新物种变得困难。在这里,我们使用锚定杂交富集在广泛的Xanthopygina样本中组装了一个系统基因组数据集,包括几乎所有已描述的属,Gastrisus内形态变异的代表以及一些我们无法分配给属的未描述分类群。最大似然分析和聚结分析都得到了一个稳定的拓扑结构,这将为黄杉属分类学的进一步发展提供一个重要的框架。九个主要血统被确定,与以前的工作最一致。成功地鉴定了Gastrisus的范围,并恢复了该属的单系核心,作为一个重新定义的Nausicotus Sharp的姊妹,其中包括Torobus synn。Gastrisus的几个大种被确定为Xanthopygus组的一个分支,并在这里被归入Drepanagrios gen. n。另外发现了6个新属,但将在未来的论文中详细描述和处理。除Gastrisus外,还将Phanolinus Sharp、Xenopygus Bernhauer、Phanolinopsis Scheerpeltz和Ocyolinus Sharp作为副食回收,得到Elecatopselaphus synn . (=Phanolinus),重新验证了Leptodiastemus Bernhauer stat. ressur。Xenopygus、Phanolinopsis和Ocyolinus的重新定义。我们提出Phanolinus scheerpeltzi nomn . n作为Phanolinus peruvianus (Scheerpeltz 1972, nec Bernhauer 1917)(以前的Elecatopselaphus)的替代名称。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Gastritis over Gastrisus Sharp (Coleoptera: Staphylinidae: Xanthopygina): Resolving a major taxonomic impediment with phylogenomics

Gastritis over Gastrisus Sharp (Coleoptera: Staphylinidae: Xanthopygina): Resolving a major taxonomic impediment with phylogenomics

Gastritis over Gastrisus Sharp (Coleoptera: Staphylinidae: Xanthopygina): Resolving a major taxonomic impediment with phylogenomics

Gastritis over Gastrisus Sharp (Coleoptera: Staphylinidae: Xanthopygina): Resolving a major taxonomic impediment with phylogenomics

With 334 species, the subtribe Xanthopygina forms a diverse and ecologically dominant component of the Neotropical beetle fauna, ranging from the southern United States south to Argentina. Species can be abundant in a variety of microhabitats and are frequently encountered in tropical forests. Although a number of morphologically distinct genera are now well defined and identifiable, the subtribe still suffers from several poorly defined genera with relatively generalized morphology. The worst of these is the genus Gastrisus Sharp, which has never had a morphological definition per se and has, over time, accumulated many morphologically disparate species. This nebulous concept of Gastrisus has further made it difficult to generically assign and describe new species. Here we assembled a phylogenomic dataset using anchored hybrid enrichment across a broad sample of Xanthopygina, including nearly all described genera, a representation of morphological variation within Gastrisus and a number of undescribed taxa we were unable to assign to a genus. Both maximum likelihood and coalescent analyses converged on a well resolved and stable topology for the subtribe, which will serve as a critical framework for continued taxonomic progress in Xanthopygina. Nine major lineages were identified, most congruent with previous work. The limits of Gastrisus were successfully identified, and the monophyletic core of the genus was recovered as sister to a redefined Nausicotus Sharp, which included Torobus syn. n. Several large species of Gastrisus were resolved as a clade of the Xanthopygus group and are here placed in Drepanagrios gen. n. An additional six new genera were discovered but will be described and treated in detail in future papers. In addition to Gastrisus, Phanolinus Sharp, Xenopygus Bernhauer, Phanolinopsis Scheerpeltz and Ocyolinus Sharp were recovered as paraphyletic, resulting in Elecatopselaphus syn. n. (=Phanolinus), the re-validation of Leptodiastemus Bernhauer stat. ressur. and the redefinition of Xenopygus, Phanolinopsis and Ocyolinus. We propose Phanolinus scheerpeltzi nom. n. as a replacement name for Phanolinus peruvianus (Scheerpeltz 1972, nec Bernhauer 1917) (previously Elecatopselaphus).

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Systematic Entomology
Systematic Entomology 生物-进化生物学
CiteScore
10.50
自引率
8.30%
发文量
49
审稿时长
>12 weeks
期刊介绍: Systematic Entomology publishes original papers on insect systematics, phylogenetics and integrative taxonomy, with a preference for general interest papers of broad biological, evolutionary or zoogeographical relevance.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信