ADC-MambaNet:一个轻量级的u形结构与曼巴和多维优先关注医学图像分割。

IF 1.6 Q3 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING
Thi-Nhu-Quynh Nguyen, Quang-Huy Ho, Van Quang Nguyen, Van-Truong Pham, Thi-Thao Tran
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引用次数: 0

摘要

目的:医学图像分割已成为辅助疾病检测和诊断的重要步骤。然而,医学图像往往表现出复杂的结构和纹理,导致需要高度复杂的方法。特别是,当使用深度学习方法时,它们通常需要大规模的预训练,从而导致显著的内存需求和增加的计算成本。众所周知的卷积神经网络(cnn)由于其有效的特征提取能力而成为医学图像分割任务的支柱。然而,由于内核的大小有限,它们常常难以捕获全局上下文。为了解决这个问题,已经引入了各种基于transformer的模型来通过自注意机制学习远程依赖关系。然而,这些架构通常会产生相对较高的计算复杂性。方法:为了解决上述挑战,我们提出了一种轻量级且计算效率高的模型,称为ADC-MambaNet,它将传统的深度卷积层与Mamba算法相结合,可以解决变压器的计算复杂性。在该模型中,设计了一种新的特征提取器——和谐曼巴卷积(HMC)块和多维优先关注(MDPA)块。这些块增强了特征提取过程,从而提高了模型的整体性能。特别是,该机制使模型能够有效地从特征映射中捕获局部和全局模式,同时保持较低的计算成本。引入了一种新的损失函数,称为平衡归一化交叉熵,与其他损失函数相比,具有良好的性能。结果:在ISIC 2018病变分割、PH2、数据科学碗2018、GlaS和Lung X-ray 5个公共医学图像数据集上的评估表明,ADC-MambaNet在保持参数紧凑和计算复杂度低的同时获得了更高的评估分数。结论:ADC-MambaNet为准确高效的医学图像分割提供了一种有前景的解决方案,特别是在资源有限或边缘计算环境下。实现代码将在https://github.com/nqnguyen812/mambaseg-model公开访问。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
ADC-MambaNet: a lightweight U-shaped architecture with mamba and multi-dimensional priority attention for medical image segmentation.

Objective.Medical image segmentation is becoming a growing crucial step in assisting with disease detection and diagnosis. However, medical images often exhibit complex structures and textures, resulting in the need for highly complex methods. Particularly, when Deep Learning methods are utilized, they often require large-scale pretraining, leading to significant memory demands and increased computational costs. The well-known Convolutional Neural Networks (CNNs) have become the backbone of medical image segmentation tasks thanks to their effective feature extraction abilities. However, they often struggle to capture global context due to the limited sizes of their kernels. To address this, various Transformer-based models have been introduced to learn long-range dependencies through self-attention mechanisms. However, these architectures typically incur relatively high computational complexity.Methods.To address the aforementioned challenges, we propose a lightweight and computationally efficient model named ADC-MambaNet, which combines the conventional Depthwise Convolutional layers with the Mamba algorithm that can address the computational complexity of Transformers. In the proposed model, a new feature extractor named Harmonious Mamba-Convolution (HMC) block, and the Multi-Dimensional Priority Attention (MDPA) block have been designed. These blocks enhance the feature extraction process, thereby improving the overall performance of the model. In particular, the mechanisms enable the model to effectively capture local and global patterns from the feature maps while keeping the computational costs low. A novel loss function called the Balanced Normalized Cross Entropy is also introduced, bringing promising performance compared to other losses.Results.Evaluations on five public medical image datasets: ISIC 2018 Lesion Segmentation, PH2, Data Science Bowl 2018, GlaS, and Lung x-ray demonstrate that ADC-MambaNet achieves higher evaluation scores while maintaining a compact parameters and low computational complexity.Conclusion.ADC-MambaNet offers a promising solution for accurate and efficient medical image segmentation, especially in resource-limited or edge-computing environments. Implementation code will be publicly accessible at:https://github.com/nqnguyen812/mambaseg-model.

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来源期刊
Biomedical Physics & Engineering Express
Biomedical Physics & Engineering Express RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING-
CiteScore
2.80
自引率
0.00%
发文量
153
期刊介绍: BPEX is an inclusive, international, multidisciplinary journal devoted to publishing new research on any application of physics and/or engineering in medicine and/or biology. Characterized by a broad geographical coverage and a fast-track peer-review process, relevant topics include all aspects of biophysics, medical physics and biomedical engineering. Papers that are almost entirely clinical or biological in their focus are not suitable. The journal has an emphasis on publishing interdisciplinary work and bringing research fields together, encompassing experimental, theoretical and computational work.
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