盐胁迫与干旱胁迫组合下芒草标准化cDNA文库的est鉴定与构建。

IF 1.5 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY
Jianfeng Liao, Zili Yi, Qian Sun, Yulai Han
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引用次数: 0

摘要

芒草(Miscanthus lutarioriparius)是一种多年生C4草本植物,具有较高的生物质产量,是一种广泛应用于生物生产的非食性生物基材料。本研究成功构建了盐胁迫、干旱胁迫和盐-干旱复合胁迫条件下不同耐盐种质的两个高质量标准化cDNA文库。该研究确定了420个高质量的表达序列标签(est),主要与信号转导机制、翻译后修饰、能量产生和转化以及氨基酸、碳水化合物和次级代谢物的合成、运输和代谢有关。基因本体(Gene Ontology, GO)术语共1370个,主要涉及细胞过程、代谢过程、刺激反应、生物调控、生物调控、细胞解剖实体、结合和催化活性。来自生物过程本体的5个氧化石墨烯术语在两个文献中都一致显示出高p值,主要与对外源物质和代谢过程的反应有关。细胞组分本体中叶绿体基质、细胞质和质体基质等细胞组分相关基因的显著富集可能解释了芒草耐盐干旱的机制。该研究有望加深我们对芒草植物功能基因的认识,并为筛选耐盐抗旱基因提供参考。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
ESTs identification and construction of normalized cDNA libraries of Miscanthus lutarioriparius across combinations of salt and drought stresses.

            Miscanthus lutarioriparius is a perennial C4 herb with high biomass production and is widely utilized as a non-food biobased material for bioproduction. This study successfully constructed two high-quality full-length normalized cDNA libraries from distinct salt-tolerant accessions of M. lutarioriparius under salt, drought, and combined salt-drought stress conditions. The study identified 420 high-quality Expressed Sequence Tags (ESTs) primarily associated with signal transduction mechanisms, post-translational modifications, energy production and transformation, as well as the synthesis, transport, and metabolism of amino acids, carbohydrates, and secondary metabolites. A total of 1370 Gene Ontology (GO) terms were obtained from two accessions, mainly related to cellular process, metabolic process, response to stimulus, biological regulation, biological regulation, cellular anatomical entity, binding, and catalytic activity. Five GO terms from the Biological Process Ontology consistently exhibited high P-values in both accessions, primarily associated with responses to exogenous substances and metabolic processes. The significant enrichment of genes associated with cellular components such as the chloroplast matrix, cytoplasm, and plastid matrix from the Cellular Component Ontology may explain the salt-drought tolerance mechanism of Miscanthus. This study is expected to deepen our understanding of the functional genes in Miscanthus plants and may provide a reference for screening salt and drought-resistance genes.

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来源期刊
Cellular and molecular biology
Cellular and molecular biology 生物-生化与分子生物学
CiteScore
1.60
自引率
12.50%
发文量
331
期刊介绍: Cellular and Molecular Biology publishes original articles, reviews, short communications, methods, meta-analysis notes, letters to editor and comments in the interdisciplinary science of Cellular and Molecular Biology linking and integrating molecular biology, biophysics, biochemistry, enzymology, physiology and biotechnology in a dynamic cell and tissue biology environment, applied to human, animals, plants tissues as well to microbial and viral cells. The journal Cellular and Molecular Biology is therefore open to intense interdisciplinary exchanges in medical, dental, veterinary, pharmacological, botanical and biological researches for the demonstration of these multiple links.
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