柞蚕触角的转录组测序用于嗅觉相关基因的鉴定。

IF 3.5 2区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
Xueting Liu, Shuwei Ma, Xinxue Zhang, Xue Li, Lei Nie, Guobao Wang
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引用次数: 0

摘要

背景:在昆虫中,嗅觉系统通过检测各种气味分子来控制生理和行为过程。尽管柞蚕具有重要的经济意义和适应性,但其嗅觉机制仍未得到充分的了解,这限制了其作为一种模式生物和害虫管理的潜力。因此,我们旨在通过转录组测序来探索触角中与嗅觉相关的基因,触角是成虫中最重要的嗅觉器官。结果:在此基础上,通过比较白桦雌雄触角的转录组图谱,共鉴定出1184个差异表达基因(DEGs),其中上调基因484个,下调基因700个。此外,筛选了20、7、30、11和2个候选基因,分别编码气味结合蛋白(OBPs)、化学感觉蛋白(CSPs)、气味受体(ORs)、嗜离子受体(IRs)和感觉神经元膜蛋白(snp),这些基因分别参与信息素感知、气味结合、农药抗性和生长发育调控。其中大部分候选基因在雌雄触须中均有表达,而这些候选基因在雌雄触须中的表达水平存在显著差异。多重序列比对表明,6个OBPs具有典型的Cys保守残基特征,序列为C1-X26-30-C2-X3-C3-X41-42-C4-X8-10-C5-X8-C6。所有csp都遵循高度保守的模式,4个Cys残基精确排列在C1-X6-C2-X18-19-C3-X2-C4之间。在ORs、IRs和snp中发现了不同数量的跨膜结构域。此外,从转录组数据中还鉴定了几个涉及化学接受信号转导的deg,包括鸟嘌呤核苷酸结合蛋白(G蛋白)、cgmp依赖性蛋白激酶(PKA)、钙调素-a (CaM-A)、丝裂原活化蛋白激酶1 (MAPK1)和磷脂酶D2 (PLD2)。结论:本研究丰富了柞蚕的嗅觉基因数据库,揭示了柞蚕交配和害虫防治的重要嗅觉机制,对提高柞蚕的育种策略和确保蚕丝产业的可持续性具有重要意义。这些发现可以为更好地理解刺槐的嗅觉机制提供理论基础。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Transcriptome sequencing of Antheraea pernyi antennae for identification of olfactory-related genes.

Background: In insects, the olfactory system governs physiological and behavioral processes by detecting various odorous molecules. Despite its economic importance and adaptability, the olfactory mechanism of Antheraea pernyi remains insufficiently understood, limiting its potential for pest management and as a model organism. Hence, we aimed to conduct transcriptome sequencing to explore olfactory-related genes in the antennae, serving as the most important olfactory organ in adult A. pernyi.

Results: Based on the datasets, 1184 differently expressed genes (DEGs), including 484 upregulated and 700 downregulated genes, were identified by comparing the transcriptome profiles of the male and female antennae of A. pernyi. Moreover, 20, 7, 30, 11, and 2 candidate genes encoding odorant-binding proteins (OBPs), chemosensory proteins (CSPs), odorant receptors (ORs), ionotropic receptors (IRs), and sensory neuron membrane proteins (SNMPs), respectively, involved in pheromone perception, odor binding, pesticide resistance, and growth and development regulation were screened, and most of which were expressed in both male and female antennae while the expression levels of these candidate genes varied significantly between males and females. Multiple sequence alignment indicated that the six OBPs exhibited typical characteristics, containing six conserved Cys residues with the sequence of C1-X26-30-C2-X3-C3-X41-42-C4-X8-10-C5-X8-C6. All CSPs followed a highly conserved pattern with four Cys residues arranged with an exact spacing of C1-X6-C2-X18-19-C3-X2-C4. Different numbers of transmembrane domains were found in ORs, IRs, and SNMPs. In addition, several DEGs involve signal transduction underlying chemoreception were also identified from the transcriptome data, including guanine nucleotide-binding protein (G protein), cGMP-dependent protein kinase (PKA), calmodulin-A (CaM-A), mitogen-activated protein kinase 1 (MAPK1), and phospholipase D2 (PLD2).

Conclusion: This study enriches the olfactory gene database of A. pernyi, providing insights into olfactory mechanisms crucial for mating and pest control, with implications for enhancing breeding strategies and ensuring the sustainability of the silk industry. These findings may serve as a theoretical foundation for a better understanding of the olfactory mechanisms of A. pernyi.

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来源期刊
BMC Genomics
BMC Genomics 生物-生物工程与应用微生物
CiteScore
7.40
自引率
4.50%
发文量
769
审稿时长
6.4 months
期刊介绍: BMC Genomics is an open access, peer-reviewed journal that considers articles on all aspects of genome-scale analysis, functional genomics, and proteomics. BMC Genomics is part of the BMC series which publishes subject-specific journals focused on the needs of individual research communities across all areas of biology and medicine. We offer an efficient, fair and friendly peer review service, and are committed to publishing all sound science, provided that there is some advance in knowledge presented by the work.
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