Shahaji H More, Tetiana Dorosh, Jean-Yves Runser, Alexis Bigo-Simon, Rachel Schurhammer, Vincent Ball, Leandro Jacomine, Marc Schmutz, Alain Chaumont, Pierre Schaaf, Loïc Jierry
{"title":"肽手性对其蛋白触发的超分子水化反应的影响。","authors":"Shahaji H More, Tetiana Dorosh, Jean-Yves Runser, Alexis Bigo-Simon, Rachel Schurhammer, Vincent Ball, Leandro Jacomine, Marc Schmutz, Alain Chaumont, Pierre Schaaf, Loïc Jierry","doi":"10.1039/d5fd00007f","DOIUrl":null,"url":null,"abstract":"<p><p>Many articles describe the use of enzymes to induce the formation of a supramolecular hydrogel. These enzymes catalyze the transformation of water-soluble precursors, often short peptides, into hydrogelators. The use of non-enzymatic proteins to induce or stabilize peptide self-assembly is a rarely reported phenomenon, which raises fundamental questions: how can a protein induce peptide self-assembly? How is the peptide recognized and how does it, or the peptide assembly, interact with the protein? The heptapeptide Fmoc-GFFYE-NH-(CH<sub>2</sub>)<sub>2</sub>-<i>s-s</i>-(CH<sub>2</sub>)<sub>2</sub>-NH-CO-(CH<sub>2</sub>)<sub>2</sub>-CO-EE-OH, called L-1 (L = natural chiral amino acids), is a water-soluble compound leading to an increasingly viscous solution over time due to the formation of nanofibers, but does not result in hydrogel (at least not within 3 months). When bovine serum albumin (BSA) is added to a freshly prepared solution of L-1, a hydrogel is obtained in less than 10 min. The variation in the L-1/BSA ratio has an impact on the gelation rate and the mechanical properties of the resulting hydrogel. Thus, the protein appears to act as (i) a catalyst and (ii) a cross-linking point. Strikingly, if the enantiomer D-1 (D = unnatural chiral amino acids) is used instead of L-1, the mixture with BSA remains liquid and non-viscous. Similar behavior is also observed for other proteins. Spectroscopic analyses (CD, fluorescence) and electronic microscopy images confirm that the L-1 peptide self-assembles in nanofibers of 10 nm diameter through β-sheet organization, which is not the case for the peptide D-1. A molecular dynamics study shows that BSA is capable of interacting with both enantiomer peptides L-1 and D-1. However, interaction with L-1 tends to unfold the peptide backbone, making the interaction with the protein more stable and promoting the assembly of L-1 peptides. Conversely, the interaction between BSA and D-1 is more dynamic and appears to be less spatially localized on the BSA. Furthermore, in this interaction, the D-1 peptide keeps its globular conformation. 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The use of non-enzymatic proteins to induce or stabilize peptide self-assembly is a rarely reported phenomenon, which raises fundamental questions: how can a protein induce peptide self-assembly? How is the peptide recognized and how does it, or the peptide assembly, interact with the protein? The heptapeptide Fmoc-GFFYE-NH-(CH<sub>2</sub>)<sub>2</sub>-<i>s-s</i>-(CH<sub>2</sub>)<sub>2</sub>-NH-CO-(CH<sub>2</sub>)<sub>2</sub>-CO-EE-OH, called L-1 (L = natural chiral amino acids), is a water-soluble compound leading to an increasingly viscous solution over time due to the formation of nanofibers, but does not result in hydrogel (at least not within 3 months). When bovine serum albumin (BSA) is added to a freshly prepared solution of L-1, a hydrogel is obtained in less than 10 min. The variation in the L-1/BSA ratio has an impact on the gelation rate and the mechanical properties of the resulting hydrogel. Thus, the protein appears to act as (i) a catalyst and (ii) a cross-linking point. Strikingly, if the enantiomer D-1 (D = unnatural chiral amino acids) is used instead of L-1, the mixture with BSA remains liquid and non-viscous. Similar behavior is also observed for other proteins. Spectroscopic analyses (CD, fluorescence) and electronic microscopy images confirm that the L-1 peptide self-assembles in nanofibers of 10 nm diameter through β-sheet organization, which is not the case for the peptide D-1. A molecular dynamics study shows that BSA is capable of interacting with both enantiomer peptides L-1 and D-1. However, interaction with L-1 tends to unfold the peptide backbone, making the interaction with the protein more stable and promoting the assembly of L-1 peptides. Conversely, the interaction between BSA and D-1 is more dynamic and appears to be less spatially localized on the BSA. Furthermore, in this interaction, the D-1 peptide keeps its globular conformation. 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引用次数: 0
摘要
许多文章描述了利用酶诱导形成超分子水凝胶。这些酶催化水溶性前体(通常是短肽)转化为凝胶。使用非酶蛋白诱导或稳定肽自组装是一种很少被报道的现象,这就提出了一个基本问题:蛋白质是如何诱导肽自组装的?肽是如何被识别的,它或肽组装是如何与蛋白质相互作用的?七肽Fmoc-GFFYE-NH-(CH2)2-s-s-(CH2)2- nh -(CH2)2- co -(CH2)2-CO-EE-OH,称为L-1 (L =天然手性氨基酸),是一种水溶性化合物,由于纳米纤维的形成,随着时间的推移,溶液会变得越来越粘稠,但不会形成水凝胶(至少3个月内不会)。将牛血清白蛋白(BSA)加入到新鲜制备的L-1溶液中,在不到10分钟的时间内得到水凝胶。L-1/BSA比例的变化对凝胶速率和所得水凝胶的机械性能有影响。因此,该蛋白似乎起到(i)催化剂和(ii)交联点的作用。引人注目的是,如果用对映体D-1 (D =非天然手性氨基酸)代替L-1,与牛血清白蛋白的混合物仍然是液态的,不粘稠。其他蛋白质也观察到类似的行为。光谱分析(CD,荧光)和电子显微镜图像证实,L-1肽通过β片组织在直径为10 nm的纳米纤维中自组装,而D-1肽则不是这样。分子动力学研究表明,牛血清白蛋白能够与对映体肽L-1和D-1相互作用。然而,与L-1的相互作用倾向于展开肽骨架,使与蛋白质的相互作用更加稳定,促进了L-1肽的组装。相反,BSA与D-1之间的相互作用是动态的,并且在BSA上的空间局限性较小。此外,在这种相互作用中,D-1肽保持其球状构象。这些结果突出了短肽的手性对蛋白质触发的超分子水化的影响。
Influence of peptide chirality on their protein-triggered supramolecular hydrogelation.
Many articles describe the use of enzymes to induce the formation of a supramolecular hydrogel. These enzymes catalyze the transformation of water-soluble precursors, often short peptides, into hydrogelators. The use of non-enzymatic proteins to induce or stabilize peptide self-assembly is a rarely reported phenomenon, which raises fundamental questions: how can a protein induce peptide self-assembly? How is the peptide recognized and how does it, or the peptide assembly, interact with the protein? The heptapeptide Fmoc-GFFYE-NH-(CH2)2-s-s-(CH2)2-NH-CO-(CH2)2-CO-EE-OH, called L-1 (L = natural chiral amino acids), is a water-soluble compound leading to an increasingly viscous solution over time due to the formation of nanofibers, but does not result in hydrogel (at least not within 3 months). When bovine serum albumin (BSA) is added to a freshly prepared solution of L-1, a hydrogel is obtained in less than 10 min. The variation in the L-1/BSA ratio has an impact on the gelation rate and the mechanical properties of the resulting hydrogel. Thus, the protein appears to act as (i) a catalyst and (ii) a cross-linking point. Strikingly, if the enantiomer D-1 (D = unnatural chiral amino acids) is used instead of L-1, the mixture with BSA remains liquid and non-viscous. Similar behavior is also observed for other proteins. Spectroscopic analyses (CD, fluorescence) and electronic microscopy images confirm that the L-1 peptide self-assembles in nanofibers of 10 nm diameter through β-sheet organization, which is not the case for the peptide D-1. A molecular dynamics study shows that BSA is capable of interacting with both enantiomer peptides L-1 and D-1. However, interaction with L-1 tends to unfold the peptide backbone, making the interaction with the protein more stable and promoting the assembly of L-1 peptides. Conversely, the interaction between BSA and D-1 is more dynamic and appears to be less spatially localized on the BSA. Furthermore, in this interaction, the D-1 peptide keeps its globular conformation. These results highlight the impact of a short peptide's chirality on protein-triggered supramolecular hydrogelation.