甘薯改良的遗传标记数据

IF 1 Q3 MULTIDISCIPLINARY SCIENCES

Data in Brief Pub Date : 2025-05-07 DOI:10.1016/j.dib.2025.111630

Imana L. Power , Brian E. Scheffler , Xiaofen F. Liu , Sheron A. Simpson , Linda L. Ballard , Marshall C. Lamb , Renee S. Arias

{"title":"甘薯改良的遗传标记数据","authors":"Imana L. Power , Brian E. Scheffler , Xiaofen F. Liu , Sheron A. Simpson , Linda L. Ballard , Marshall C. Lamb , Renee S. Arias","doi":"10.1016/j.dib.2025.111630","DOIUrl":null,"url":null,"abstract":"<div><div>A total of 768 molecular markers were developed for <em>Ipomoea batatas</em> (L.) Lam., consisting of 689 simple sequence repeats (SSRs) and 79 single nucleotide polymorphisms (SNPs). All the markers were distributed across the sweet potato genome, averaging 51 markers per chromosome. The markers were tested on DNA samples from five cultivars of <em>I. batatas</em>, assessing their amplification efficiency and polymorphism. Here we provide the primer sequences tested, their chromosome locations, the analysis including amplicon sizes, and highlight 92 that showed polymorphism between Beauregard and Tanzania. This dataset offers valuable resources for constructing high-resolution linkage maps and facilitates advanced genetic studies and breeding programs in sweetpotato.</div></div>","PeriodicalId":10973,"journal":{"name":"Data in Brief","volume":"60 ","pages":"Article 111630"},"PeriodicalIF":1.0000,"publicationDate":"2025-05-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Genetic marker data for sweetpotato improvement\",\"authors\":\"Imana L. Power , Brian E. Scheffler , Xiaofen F. Liu , Sheron A. Simpson , Linda L. Ballard , Marshall C. Lamb , Renee S. Arias\",\"doi\":\"10.1016/j.dib.2025.111630\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>A total of 768 molecular markers were developed for <em>Ipomoea batatas</em> (L.) Lam., consisting of 689 simple sequence repeats (SSRs) and 79 single nucleotide polymorphisms (SNPs). All the markers were distributed across the sweet potato genome, averaging 51 markers per chromosome. The markers were tested on DNA samples from five cultivars of <em>I. batatas</em>, assessing their amplification efficiency and polymorphism. Here we provide the primer sequences tested, their chromosome locations, the analysis including amplicon sizes, and highlight 92 that showed polymorphism between Beauregard and Tanzania. This dataset offers valuable resources for constructing high-resolution linkage maps and facilitates advanced genetic studies and breeding programs in sweetpotato.</div></div>\",\"PeriodicalId\":10973,\"journal\":{\"name\":\"Data in Brief\",\"volume\":\"60 \",\"pages\":\"Article 111630\"},\"PeriodicalIF\":1.0000,\"publicationDate\":\"2025-05-07\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Data in Brief\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S2352340925003610\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"MULTIDISCIPLINARY SCIENCES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Data in Brief","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2352340925003610","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"MULTIDISCIPLINARY SCIENCES","Score":null,"Total":0}

引用次数: 0

摘要

共建立了768个分子标记。林。由689个简单序列重复序列（SSRs）和79个单核苷酸多态性（SNPs）组成。所有标记都分布在甘薯基因组中，平均每条染色体51个标记。在5个品种的DNA样品上进行了标记的扩增效率和多态性检测。这里我们提供了测试的引物序列，它们的染色体位置，包括扩增子大小的分析，并突出了在Beauregard和Tanzania之间显示多态性的92个引物序列。该数据集为构建高分辨率连锁图谱提供了宝贵的资源，并促进了甘薯的高级遗传研究和育种计划。

本文章由计算机程序翻译，如有差异，请以英文原文为准。

查看原文本刊更多论文

Genetic marker data for sweetpotato improvement

A total of 768 molecular markers were developed for Ipomoea batatas (L.) Lam., consisting of 689 simple sequence repeats (SSRs) and 79 single nucleotide polymorphisms (SNPs). All the markers were distributed across the sweet potato genome, averaging 51 markers per chromosome. The markers were tested on DNA samples from five cultivars of I. batatas, assessing their amplification efficiency and polymorphism. Here we provide the primer sequences tested, their chromosome locations, the analysis including amplicon sizes, and highlight 92 that showed polymorphism between Beauregard and Tanzania. This dataset offers valuable resources for constructing high-resolution linkage maps and facilitates advanced genetic studies and breeding programs in sweetpotato.

求助全文

通过发布文献求助，成功后即可免费获取论文全文。去求助

来源期刊

Data in Brief MULTIDISCIPLINARY SCIENCES-

CiteScore

3.10

自引率

0.00%

发文量

996

审稿时长

70 days

期刊介绍： Data in Brief provides a way for researchers to easily share and reuse each other''s datasets by publishing data articles that: -Thoroughly describe your data, facilitating reproducibility. -Make your data, which is often buried in supplementary material, easier to find. -Increase traffic towards associated research articles and data, leading to more citations. -Open up doors for new collaborations. Because you never know what data will be useful to someone else, Data in Brief welcomes submissions that describe data from all research areas.