药物发现中的计算机方法的荟萃分析和回顾-第1部分:从大数据到化学空间的技术演变和趋势。

IF 2.9 3区 医学 Q2 GENETICS & HEREDITY
Arife Uzundurukan, Mark Nelson, Christopher Teske, Mohamed Shahidul Islam, Elzagheid Mohamed, John Victor Christy, Holli-Joi Martin, Eugene Muratov, Samantha Glover, Domenico Fuoco
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引用次数: 0

摘要

本综述概述了对药物发现至关重要的先进计算机方法,强调了它们与数据科学的集成,并通过对现有技术的全面元分析调查了数据科学、机器学习和人工智能的有效性。这个荟萃分析的目的是根据它们的应用和知识的可及性对这些技术进行排名。最初,一个搜索策略产生了900篇论文,然后将其细化为两个子集:自2000年以来被引用最多的前300篇论文,以及根据高影响力选择进行系统审查的论文。根据这些文章对社会的影响,确定了97篇文章供讨论。重点仍然是这些学科的定性影响,而不仅仅是新药批准等指标。最后,该综述强调了大数据在增强我们对候选药物从开发到商业化轨迹的理解方面的作用,利用存储在公共数据库中的信息到化学空间。一些关键词的图解外推法(药物发现;大数据;数据库;元数据)以及它们随时间的演变(就可用的绝对项而言)。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Meta-analysis and review of in silico methods in drug discovery - part 1: technological evolution and trends from big data to chemical space.

This review offers an overview of advanced in silico methods crucial for drug discovery, emphasizing their integration with data science, and investigates the effectiveness of data science, machine learning, and artificial intelligence via a thorough meta-analysis of existing technologies. This meta-analysis aims to rank these technologies based on their applications and accessibility of knowledge. Initially, a search strategy yielded 900 papers, which were then refined into two subsets: the top 300 most-cited papers since 2000 and papers selected for systematic review based on high impact. From these, 97 articles were identified for discussion, categorized by their influence on society. The focus remains on the qualitative impact of these disciplines rather than solely on metrics like new drug approvals. Ultimately, the review underscores the role of big data in enhancing our comprehension of drug candidate trajectories from development to commercialization, utilizing information stored in publicly available databases to chemical space. Graphical extrapolation of some keywords (Drug Discovery; Big Data; Database; Metadata) discussed in this article and their evolution (in terms of absolute items that are available) by time.

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来源期刊
Pharmacogenomics Journal
Pharmacogenomics Journal 医学-药学
CiteScore
7.20
自引率
0.00%
发文量
35
审稿时长
6-12 weeks
期刊介绍: The Pharmacogenomics Journal is a print and electronic journal, which is dedicated to the rapid publication of original research on pharmacogenomics and its clinical applications. Key areas of coverage include: Personalized medicine Effects of genetic variability on drug toxicity and efficacy Identification and functional characterization of polymorphisms relevant to drug action Pharmacodynamic and pharmacokinetic variations and drug efficacy Integration of new developments in the genome project and proteomics into clinical medicine, pharmacology, and therapeutics Clinical applications of genomic science Identification of novel genomic targets for drug development Potential benefits of pharmacogenomics.
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